Gene Cagg_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1190 
Symbol 
ID7267939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1468431 
End bp1469339 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content59% 
IMG OID643566033 
Productrod shape-determining protein MreC 
Protein accessionYP_002462535 
Protein GI219848102 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.759069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00790921 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGATT TTCTCGATGA ACGTCCACTG AAGCTACGGC GTGACCGGTT TGGTGACACT 
AATTATGGTC GGGTCGTGGT GACGGCCATC GCTCTTCTCC TGTTGAGCGT GATCCTCATC
GTGCTCGACC GGCAAGGAGT GGTATCACCG GTTCGGTTGG CCGCACACGA GCAGTTGCAG
CCGGTGATTA GTTGGCTGAC CGAACGCCGG ATGGCGCTTG AGGCTTGGTG GGCTACACCA
CGCGATGTTG TCACTCTCCA GACCCGAGTA GCCGAACTAG AGGCCGAAAA TGCTCAGTTG
CGTAACGATG TGTTGCGACT TGAGCAGGCC CGGGTCGAGA ATATTTTTCT GCGTCAGCAG
TTAGCTATTA CACAAGCTCA TCCGTGGCGA GTTCTCGGTG CCGAGGTGAT GGTGCGTGCC
CCTGATGCAG CTCGTCGGGT GATGACGATT GCGCGTGGCG CCAATGACGG TGTGCAGACG
GGGATGGCGG TGATTGGGCA GCAACCGGGC AACCCACCGG CATTGATCGG GGTGGTAGAA
ACGGTGGGGC CGCGCACGGC AGAGGTGTTG CTCATTACCG ATATCAGTAG TCAGCTCAGT
GTGCGGGTTT TACAGCCTAA TGGGGCACCG CTCGGTTTGC TGCAAGGTCA ATGGCAGCGC
GGCTCGCGGT TGCGGGTTGA GTTGATCGAC CGTAGTACTA CCCTACGGGT CGGTGAGCAT
GTGGTCACCG CCGGCTTGAG TGGTGCGCTT GATCTCCCCC TTGATCTGTC AGCGATGCCG
GCGGTAGTGC CGATCGGCTT TATTGAAACG GTACGGCAAG AGGGGCAGCG CCAAATCGGT
GACATCCGGC CTTTCGCTGA TCCCGATCAG GTACGCTACG TGTGGGTGAT TCTCAGCCAA
GACGAATAG
 
Protein sequence
MRDFLDERPL KLRRDRFGDT NYGRVVVTAI ALLLLSVILI VLDRQGVVSP VRLAAHEQLQ 
PVISWLTERR MALEAWWATP RDVVTLQTRV AELEAENAQL RNDVLRLEQA RVENIFLRQQ
LAITQAHPWR VLGAEVMVRA PDAARRVMTI ARGANDGVQT GMAVIGQQPG NPPALIGVVE
TVGPRTAEVL LITDISSQLS VRVLQPNGAP LGLLQGQWQR GSRLRVELID RSTTLRVGEH
VVTAGLSGAL DLPLDLSAMP AVVPIGFIET VRQEGQRQIG DIRPFADPDQ VRYVWVILSQ
DE