Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1139 |
Symbol | |
ID | 7267887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1406671 |
End bp | 1408602 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643565982 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_002462485 |
Protein GI | 219848052 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.535539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0122943 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCGGCG ATACGATCTT GCTGTTACTC ACCAACTCCA CCAACCGGCA ACTGTTAGAA ACGTGGTTGG GCCACCACTA TTCGATCATC GTCGGCAATG ACAAAACGGC TTTGCAACAA CCGTTTCAAC TGTGTATTAT CGATGGCCCC GCCCTCAACC GGTACGAAGC CGAGATCCAC GCCCGTCGCG CAACTGCCCA CCCTATCTTT CTCCCGTTCT TACTTGTTAC GACACGACGC GATGTTCACC TGTACACCCG TCATCTTTGG CAGACAGTTG ACGAGTTGGT GACCAGTCCA ATTGAGAAAG CAGAATTGCT CGCACGGATC GAGATCCTCT TGCGCGCACG CCGGTCGGCG CTCGAATTGA ACCGTCTTCA GCAGGCGATG CTATCGAGTA CCCAAACGTG GTTACAGTTA GCCGTCAGCG CATCCCAAAT CGGCTTGTGG GAATGGGATC TTATCACGAA CCGTGTCTTC TTTTCACCAG AATGGAAAGC ACAGCTTGGA TATGCCGCTG ATGAGCTGAA CGATTCCTTC GCTGTCTGGG AAGAACGCCT CCACCCCGAT GATCGTGAGC GCTGCCTCCG CACCTTGCAG CAATATCTTG AGCGGCCATG GCCGAACTTT TCCCTCGAAT TCCGCTTGCG CCATAAAGAC GGGAGCTACC GTTGGATCCG CTCACAAGCT GCCCTTATCT ACGATGAATC TGGTCGCCCA ACTCATATGC TCGGTGCCCA CCTTGATCTA ACCGAACGTA AACAGCTTGA AGAGGAACGG CAACACCTTA CCGAACAACT CTTTCAGTCG CAGAAGCTAG AGGCAATTGG GGCGCTGACC AGTGGCATTG CACACGACCT CAACAATTTG TTGGTGCCGA TTATTGGTTT CGCCGAACTC GGTATGTTAC AGCTCTCTCC GTCGAGTGAG CTGTACACCG ATTTCGACCA GATCCGGGCG GCAGGTATTC GGGCTACTGC CCTGACTCGG CAGATTTTAG CCTTTAGCCG TCGGCAACGA CTCGAACCAA AACCGGTGAA TCTCAATCAG GTAATTAGCG ACTTCATCGG TATTTTGCGT CGTTTGATCG GTGAACGCAT CACCATCCAT CTACAGCTCG CACCCTCTTT GCCATTGACA CATGCCGATC CCGGGCAACT CGAACAGGTA TTACTTAACC TAGTTATTAA CGCTCGTGAT GCAATCGAAG GCTACGGTAC CATCACCATC TCGACGGCAT CGGTTACCAT TCCACCTTCG CCCTCAGACC AAAGAGCCAG ACTACTTCCC GGCGAGTATA TTATCCTCCA GGTACACGAT ACCGGCTGTG GAATTGAGCC AGATATTTTA CCTCGGATTT TCGAGCCATT TTTTACCACA AAACCACCGG GAAAAGGAAC CGGTCTTGGT CTGGCTACTG TCTTTGGCAT TATCAAGCAA TATCGCGGCC ATATCGATGT CCAAAGTGTG CCTCAGCAGG GGACAACGTT TACTATGTAC CTGCCGACAC TCACCGATTC AACACCGGCC GGTGAAGCAC CATTGCCATC CTCAGATACA GCATTGACCG GGCACGAAAC GGTGCTCGTC GTAGATGACG AACCTTCCGT ACTCTACCTC ATCACCAGTG CGTTACGGTT GTACGGGTAC CGGGTACTAG AAGCTACCGA TCCGCAGCAC GGGATCAGTC TCGCCGTAGA TCGTGAGCAG CCTATCGACC TCTTAATTGC TGACGTGATG TTACCGGGAA TAACCGGCGA CGAGCTATAC CGCTCACTTG CCGCCCAACA ACCTAACCTG CACGTCCTGT TCATCTCGGC ACAGACGGAT GATTCATATG ATCTACCACC CAATGCCCCG CTGTTGATGA AACCGTTTAC CCTGAACCAA TTGCTGCAAA AAGTACGTGC CGCACTTATG GTAACGGTGT AA
|
Protein sequence | MVGDTILLLL TNSTNRQLLE TWLGHHYSII VGNDKTALQQ PFQLCIIDGP ALNRYEAEIH ARRATAHPIF LPFLLVTTRR DVHLYTRHLW QTVDELVTSP IEKAELLARI EILLRARRSA LELNRLQQAM LSSTQTWLQL AVSASQIGLW EWDLITNRVF FSPEWKAQLG YAADELNDSF AVWEERLHPD DRERCLRTLQ QYLERPWPNF SLEFRLRHKD GSYRWIRSQA ALIYDESGRP THMLGAHLDL TERKQLEEER QHLTEQLFQS QKLEAIGALT SGIAHDLNNL LVPIIGFAEL GMLQLSPSSE LYTDFDQIRA AGIRATALTR QILAFSRRQR LEPKPVNLNQ VISDFIGILR RLIGERITIH LQLAPSLPLT HADPGQLEQV LLNLVINARD AIEGYGTITI STASVTIPPS PSDQRARLLP GEYIILQVHD TGCGIEPDIL PRIFEPFFTT KPPGKGTGLG LATVFGIIKQ YRGHIDVQSV PQQGTTFTMY LPTLTDSTPA GEAPLPSSDT ALTGHETVLV VDDEPSVLYL ITSALRLYGY RVLEATDPQH GISLAVDREQ PIDLLIADVM LPGITGDELY RSLAAQQPNL HVLFISAQTD DSYDLPPNAP LLMKPFTLNQ LLQKVRAALM VTV
|
| |