| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1139 |
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| Symbol | |
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| ID | 7267887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | + |
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| Start bp | 1406671 |
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| End bp | 1408602 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643565982 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002462485 |
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| Protein GI | 219848052 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.535539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0122943 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGGCG ATACGATCTT GCTGTTACTC ACCAACTCCA CCAACCGGCA ACTGTTAGAA
ACGTGGTTGG GCCACCACTA TTCGATCATC GTCGGCAATG ACAAAACGGC TTTGCAACAA
CCGTTTCAAC TGTGTATTAT CGATGGCCCC GCCCTCAACC GGTACGAAGC CGAGATCCAC
GCCCGTCGCG CAACTGCCCA CCCTATCTTT CTCCCGTTCT TACTTGTTAC GACACGACGC
GATGTTCACC TGTACACCCG TCATCTTTGG CAGACAGTTG ACGAGTTGGT GACCAGTCCA
ATTGAGAAAG CAGAATTGCT CGCACGGATC GAGATCCTCT TGCGCGCACG CCGGTCGGCG
CTCGAATTGA ACCGTCTTCA GCAGGCGATG CTATCGAGTA CCCAAACGTG GTTACAGTTA
GCCGTCAGCG CATCCCAAAT CGGCTTGTGG GAATGGGATC TTATCACGAA CCGTGTCTTC
TTTTCACCAG AATGGAAAGC ACAGCTTGGA TATGCCGCTG ATGAGCTGAA CGATTCCTTC
GCTGTCTGGG AAGAACGCCT CCACCCCGAT GATCGTGAGC GCTGCCTCCG CACCTTGCAG
CAATATCTTG AGCGGCCATG GCCGAACTTT TCCCTCGAAT TCCGCTTGCG CCATAAAGAC
GGGAGCTACC GTTGGATCCG CTCACAAGCT GCCCTTATCT ACGATGAATC TGGTCGCCCA
ACTCATATGC TCGGTGCCCA CCTTGATCTA ACCGAACGTA AACAGCTTGA AGAGGAACGG
CAACACCTTA CCGAACAACT CTTTCAGTCG CAGAAGCTAG AGGCAATTGG GGCGCTGACC
AGTGGCATTG CACACGACCT CAACAATTTG TTGGTGCCGA TTATTGGTTT CGCCGAACTC
GGTATGTTAC AGCTCTCTCC GTCGAGTGAG CTGTACACCG ATTTCGACCA GATCCGGGCG
GCAGGTATTC GGGCTACTGC CCTGACTCGG CAGATTTTAG CCTTTAGCCG TCGGCAACGA
CTCGAACCAA AACCGGTGAA TCTCAATCAG GTAATTAGCG ACTTCATCGG TATTTTGCGT
CGTTTGATCG GTGAACGCAT CACCATCCAT CTACAGCTCG CACCCTCTTT GCCATTGACA
CATGCCGATC CCGGGCAACT CGAACAGGTA TTACTTAACC TAGTTATTAA CGCTCGTGAT
GCAATCGAAG GCTACGGTAC CATCACCATC TCGACGGCAT CGGTTACCAT TCCACCTTCG
CCCTCAGACC AAAGAGCCAG ACTACTTCCC GGCGAGTATA TTATCCTCCA GGTACACGAT
ACCGGCTGTG GAATTGAGCC AGATATTTTA CCTCGGATTT TCGAGCCATT TTTTACCACA
AAACCACCGG GAAAAGGAAC CGGTCTTGGT CTGGCTACTG TCTTTGGCAT TATCAAGCAA
TATCGCGGCC ATATCGATGT CCAAAGTGTG CCTCAGCAGG GGACAACGTT TACTATGTAC
CTGCCGACAC TCACCGATTC AACACCGGCC GGTGAAGCAC CATTGCCATC CTCAGATACA
GCATTGACCG GGCACGAAAC GGTGCTCGTC GTAGATGACG AACCTTCCGT ACTCTACCTC
ATCACCAGTG CGTTACGGTT GTACGGGTAC CGGGTACTAG AAGCTACCGA TCCGCAGCAC
GGGATCAGTC TCGCCGTAGA TCGTGAGCAG CCTATCGACC TCTTAATTGC TGACGTGATG
TTACCGGGAA TAACCGGCGA CGAGCTATAC CGCTCACTTG CCGCCCAACA ACCTAACCTG
CACGTCCTGT TCATCTCGGC ACAGACGGAT GATTCATATG ATCTACCACC CAATGCCCCG
CTGTTGATGA AACCGTTTAC CCTGAACCAA TTGCTGCAAA AAGTACGTGC CGCACTTATG
GTAACGGTGT AA
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| Protein sequence | MVGDTILLLL TNSTNRQLLE TWLGHHYSII VGNDKTALQQ PFQLCIIDGP ALNRYEAEIH
ARRATAHPIF LPFLLVTTRR DVHLYTRHLW QTVDELVTSP IEKAELLARI EILLRARRSA
LELNRLQQAM LSSTQTWLQL AVSASQIGLW EWDLITNRVF FSPEWKAQLG YAADELNDSF
AVWEERLHPD DRERCLRTLQ QYLERPWPNF SLEFRLRHKD GSYRWIRSQA ALIYDESGRP
THMLGAHLDL TERKQLEEER QHLTEQLFQS QKLEAIGALT SGIAHDLNNL LVPIIGFAEL
GMLQLSPSSE LYTDFDQIRA AGIRATALTR QILAFSRRQR LEPKPVNLNQ VISDFIGILR
RLIGERITIH LQLAPSLPLT HADPGQLEQV LLNLVINARD AIEGYGTITI STASVTIPPS
PSDQRARLLP GEYIILQVHD TGCGIEPDIL PRIFEPFFTT KPPGKGTGLG LATVFGIIKQ
YRGHIDVQSV PQQGTTFTMY LPTLTDSTPA GEAPLPSSDT ALTGHETVLV VDDEPSVLYL
ITSALRLYGY RVLEATDPQH GISLAVDREQ PIDLLIADVM LPGITGDELY RSLAAQQPNL
HVLFISAQTD DSYDLPPNAP LLMKPFTLNQ LLQKVRAALM VTV
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