Gene Cagg_1042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1042 
Symbol 
ID7268414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1290020 
End bp1291243 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content53% 
IMG OID643565887 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_002462392 
Protein GI219847959 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTGGC TTACCATTCT GATTATCGTT ATTCAATGTT TTGTGATCAC GCTGGCCGTG 
ACTACCGCCT TTGCCTATCT AACCCTGTTC GAGCGGCGGT TGTTGGCCCG CTTGCAAAAC
CGTGTTGGTC CTAACCGGGC CGGGCCGGCC GGTTTTTTAC AACCGGCCGC CGATGCGGTC
AAGCTGTTCT TCAAAGAGGA TATTGTGCCG GCATTGGCTG ATAAGCCGGT CTACTTGTTG
GCGCCGGCAT TAGCAGTGAT ACCGGCATTG ATCATCTGGG CGGTCATCCC GTTTGGTTGT
CTCAATCTGA ACTGGGATTA TCAAGCGTGT TATGATCCCA ATCGTACCAA TCTGTGGAAT
ATTCTCCAGA TTACCGATTT GAATATTGGG GTTCTGTACA TTCTCGCGAT AACGAGTATT
GGTGTGTACG GAATCACGCT GGCCGGTTGG GCTTCAAACA ACAAATATTC GATGTTGGGT
GGGATCCGTT CCTCGGCTCA GCTCATTTCG TATGAGTTAG CACTGGGATG CGCGGTGCTG
AGCGTGGTAA TGACATACGG TACGCTCTCG ACCCACGAGA TCATCGCCCA ACAGCGTGGT
TGGTTGTGGG GCATCATTCC CCAACTGCTC GGCTTCTTTC TCTATATGAT CGCCGCTACT
GCCGAAGTGG TGCGGGCACC GTTCGATTTG GTTGAAGCCG AACAAGAGCT GACCGGCGGT
TATAACACCG AATACGGCTC GATGAAGTTT GCCCTCTTCT TCATGGCCGA ATACATCAAA
CTGATCGCCG TTTCGGCATT GGCCGTCACC TTCTTCTTCG GTGGTTGGCA TTTCCCCGGT
CTCGACATTC TCGGCCGTGA AGTGACAGCA CTGGCCGGGC CGGTTGCCGG CAGCATTGTC
TTCGGGATTG TCTCGCTCGG TTCATTCTTG CTTAAGGTGG TTGTGTTCCT CTTTATTTCG
GTGTGGGTCC GGGCTTCGTG GCCACGTCTG CGCTACGACC GTCTGATGGA TTTGGGGTGG
AAGTGGTTGT TGCCGTTGGG TCTCCTCAAT CTCGCCTACA CGGCAGTGGT GATTGTGCTC
GTTCCCGATC GGGTCGTGCA TTCGTGGATC CTGTTCGGCC TCGGTGCGTT GACGATTGCG
ATTGCGATTG GCTTCAACCG TACTCCCAAA CCGGTTGACA ATGTGACGTT AGTCAGCGAT
ATTCAATTGC CGCATGGGAA TTAG
 
Protein sequence
MDWLTILIIV IQCFVITLAV TTAFAYLTLF ERRLLARLQN RVGPNRAGPA GFLQPAADAV 
KLFFKEDIVP ALADKPVYLL APALAVIPAL IIWAVIPFGC LNLNWDYQAC YDPNRTNLWN
ILQITDLNIG VLYILAITSI GVYGITLAGW ASNNKYSMLG GIRSSAQLIS YELALGCAVL
SVVMTYGTLS THEIIAQQRG WLWGIIPQLL GFFLYMIAAT AEVVRAPFDL VEAEQELTGG
YNTEYGSMKF ALFFMAEYIK LIAVSALAVT FFFGGWHFPG LDILGREVTA LAGPVAGSIV
FGIVSLGSFL LKVVVFLFIS VWVRASWPRL RYDRLMDLGW KWLLPLGLLN LAYTAVVIVL
VPDRVVHSWI LFGLGALTIA IAIGFNRTPK PVDNVTLVSD IQLPHGN