Gene Cagg_0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0978 
Symbol 
ID7268350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1210269 
End bp1211111 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content54% 
IMG OID643565827 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_002462332 
Protein GI219847899 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0235504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0652516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTA TTGACGATAC GCAACCACTG ATCGACCTGC CGCTGGTGTT TTTCGATGTC 
GAAACCACCG GTCTCGACTT GCAAAACGGC CATCGTATCT GCGAGCTAGC TATGCTACGG
CGTGAACACC GGCAGATCAC CGGTCAGATC AATACATTGA TCAATCCCGA ACGTGAGCTT
GATCCACAAG CAAGCCAGGT TAACGGGATT CGAGCCGAAG ATCTGCAGAG CGCTCCACGC
TTCGCCGAGT TGACCGTACA GGTAGTGCAA TTAAGTCAAC AGGCGGTACG GGTCGCTCAT
AATTTACCAT TCGATGAAAG CTTTCTCAAT ATGGAACTGG CTCGGGCCGG TTATCCACCG
CTGACCGGAC CCGCACTCGA TACCCTCGAA TTAGCCCGCC GCCTCGGTAT ACGCCGTGGA
TCACTCAGCC TTGGTGCCCT CGCAACATCG TTCGGTCTCC CAACACCTAC TCACCGCGCA
ATGGATGATG TGCTAACGTT GCATGCCCTC TTCGACCGGT TGGTGGCGAA ATTGGCCGAT
TACGGTGTGA CGACACTCTA CGATGCGCTA CGTTTCACCC GTGGCCTACT CCCCGGTCAA
CCCGAACCAG AAGCACCCCC ACCACTCGCC GCCGCATTGG CAAGCGGTAC GACATTACGC
ATTATCTACA CCTCAAATAG TAACCCACAG CCAATTGAAC GCCGGATTCG CCCCATCGAA
TTGGTGGTCG AGCCAAACGG CCTCAGCGTG CGGGCCTTTT GCTATCTGCG TAACGATATT
CGCAATTTCC TCCTTGCTAA AATTAGTGCC TACCTTCCCG ATTTTTCTGA TAAATCAGAC
TAA
 
Protein sequence
MTTIDDTQPL IDLPLVFFDV ETTGLDLQNG HRICELAMLR REHRQITGQI NTLINPEREL 
DPQASQVNGI RAEDLQSAPR FAELTVQVVQ LSQQAVRVAH NLPFDESFLN MELARAGYPP
LTGPALDTLE LARRLGIRRG SLSLGALATS FGLPTPTHRA MDDVLTLHAL FDRLVAKLAD
YGVTTLYDAL RFTRGLLPGQ PEPEAPPPLA AALASGTTLR IIYTSNSNPQ PIERRIRPIE
LVVEPNGLSV RAFCYLRNDI RNFLLAKISA YLPDFSDKSD