Gene Cagg_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0977 
Symbol 
ID7268349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1209031 
End bp1210272 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content55% 
IMG OID643565826 
ProductSH3 type 3 domain protein 
Protein accessionYP_002462331 
Protein GI219847898 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00363101 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0377328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGA TACTCAATCA GATCTCACCA CCAATAGCAA TCGGTCTCAT CATTGTTGGT 
CTGATCATCA TTTTGTTGGT TGTGATCCTC ATTCGTCGGC GGCGAGCTGC TCAACCAGGC
ATACAGCTCC CCCCAGCACT ACCGGCGACA TCGATTGACT ACACAGCCGT CCCTCTTGAA
GAACCGCAGA GTTGGCAAGA TCGTCTGCGC AATCTATCGC TGGCCGCTAA GATCCTGTTT
GTCCTTGTGC CTATTTTGCT CTGTATGAGC GTTGGGGTAT TGGTCTTAAG CCTAACCAAC
AGGAGCACGG CAGCACCACC TCCTACGCCC ACACCATCAC CAATCCCGAT TAGCTTGACA
ATAGAAAATG CAACCGTTGT CCGTGCCGAA CCACCAACGA TCAATGTGCG TGTACACACT
ACCGGCCTAC TCGATGATAC CGAACTCGTC GTGACATTGT ACGCCGATAA TCAACCGATC
AAATGGATCG ATCCAGAACA GACTATTCGT ATTCGTAACA ATCGTGGCGA AGTACGCGCC
CCCAAGCTCG CCGACGGCGA TCCCACCCCG GAAGGGCCGC GCTACACTGT TGTCGTTAGT
CTTCCCGACG GCTCACTCAG TGCTGAAGCC GAATTGCAGA TTCCGTCACG TTTCGCGGCT
GCGTTCTACG GAACCGTTGC CGAAAACCCG ACAGCGACCT CGCAACCGAC AGCGACGAAT
ACGCCGGTAG CTCAGGCTAC TCCTGCGCCT ACTCCCACTC CGACCATCGC ACCAACACCT
ACTTTAGTCG CCGTCCAGCA AGTCGCTGTT ACCAATGGCG GCAATGTGCG CAAATTACCC
TTCACCGGTG TCTATAATGT GATCGGTGGT GTCAATGCCG GTGAACAGGT GCAAATCATT
GCGCGCACAC CCAACGCACT CTGGTACTAC GTGCGCACGG TGCGCGATGA GGTAGGCTGG
GTAAGTGCCT CTTTGCTCGC AGTGACCGAT CTGATCGCTG CCGAGACACC GGTTGCCAAC
ATGGTGACGG TGTTTGTCAG CGGACCCATC TATCTAGCGG CTGACCCGGC GAGTACGCAG
ATCGATCGTG TTGAACGGAA TGAAGTGGTC GAATTGCTAG AACGCACTGC CGACGGTATG
TGGTATAAAG TGCTAAACGT GCGTGAGCGC GAGGGATGGG TCCAGGCCAG CTTGCTCGGT
ATTCCCGATG ATGTAGCAGC CCAAGTACCG GTAGCACGAT GA
 
Protein sequence
MQTILNQISP PIAIGLIIVG LIIILLVVIL IRRRRAAQPG IQLPPALPAT SIDYTAVPLE 
EPQSWQDRLR NLSLAAKILF VLVPILLCMS VGVLVLSLTN RSTAAPPPTP TPSPIPISLT
IENATVVRAE PPTINVRVHT TGLLDDTELV VTLYADNQPI KWIDPEQTIR IRNNRGEVRA
PKLADGDPTP EGPRYTVVVS LPDGSLSAEA ELQIPSRFAA AFYGTVAENP TATSQPTATN
TPVAQATPAP TPTPTIAPTP TLVAVQQVAV TNGGNVRKLP FTGVYNVIGG VNAGEQVQII
ARTPNALWYY VRTVRDEVGW VSASLLAVTD LIAAETPVAN MVTVFVSGPI YLAADPASTQ
IDRVERNEVV ELLERTADGM WYKVLNVRER EGWVQASLLG IPDDVAAQVP VAR