Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0977 |
Symbol | |
ID | 7268349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1209031 |
End bp | 1210272 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643565826 |
Product | SH3 type 3 domain protein |
Protein accession | YP_002462331 |
Protein GI | 219847898 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00363101 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0377328 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACGA TACTCAATCA GATCTCACCA CCAATAGCAA TCGGTCTCAT CATTGTTGGT CTGATCATCA TTTTGTTGGT TGTGATCCTC ATTCGTCGGC GGCGAGCTGC TCAACCAGGC ATACAGCTCC CCCCAGCACT ACCGGCGACA TCGATTGACT ACACAGCCGT CCCTCTTGAA GAACCGCAGA GTTGGCAAGA TCGTCTGCGC AATCTATCGC TGGCCGCTAA GATCCTGTTT GTCCTTGTGC CTATTTTGCT CTGTATGAGC GTTGGGGTAT TGGTCTTAAG CCTAACCAAC AGGAGCACGG CAGCACCACC TCCTACGCCC ACACCATCAC CAATCCCGAT TAGCTTGACA ATAGAAAATG CAACCGTTGT CCGTGCCGAA CCACCAACGA TCAATGTGCG TGTACACACT ACCGGCCTAC TCGATGATAC CGAACTCGTC GTGACATTGT ACGCCGATAA TCAACCGATC AAATGGATCG ATCCAGAACA GACTATTCGT ATTCGTAACA ATCGTGGCGA AGTACGCGCC CCCAAGCTCG CCGACGGCGA TCCCACCCCG GAAGGGCCGC GCTACACTGT TGTCGTTAGT CTTCCCGACG GCTCACTCAG TGCTGAAGCC GAATTGCAGA TTCCGTCACG TTTCGCGGCT GCGTTCTACG GAACCGTTGC CGAAAACCCG ACAGCGACCT CGCAACCGAC AGCGACGAAT ACGCCGGTAG CTCAGGCTAC TCCTGCGCCT ACTCCCACTC CGACCATCGC ACCAACACCT ACTTTAGTCG CCGTCCAGCA AGTCGCTGTT ACCAATGGCG GCAATGTGCG CAAATTACCC TTCACCGGTG TCTATAATGT GATCGGTGGT GTCAATGCCG GTGAACAGGT GCAAATCATT GCGCGCACAC CCAACGCACT CTGGTACTAC GTGCGCACGG TGCGCGATGA GGTAGGCTGG GTAAGTGCCT CTTTGCTCGC AGTGACCGAT CTGATCGCTG CCGAGACACC GGTTGCCAAC ATGGTGACGG TGTTTGTCAG CGGACCCATC TATCTAGCGG CTGACCCGGC GAGTACGCAG ATCGATCGTG TTGAACGGAA TGAAGTGGTC GAATTGCTAG AACGCACTGC CGACGGTATG TGGTATAAAG TGCTAAACGT GCGTGAGCGC GAGGGATGGG TCCAGGCCAG CTTGCTCGGT ATTCCCGATG ATGTAGCAGC CCAAGTACCG GTAGCACGAT GA
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Protein sequence | MQTILNQISP PIAIGLIIVG LIIILLVVIL IRRRRAAQPG IQLPPALPAT SIDYTAVPLE EPQSWQDRLR NLSLAAKILF VLVPILLCMS VGVLVLSLTN RSTAAPPPTP TPSPIPISLT IENATVVRAE PPTINVRVHT TGLLDDTELV VTLYADNQPI KWIDPEQTIR IRNNRGEVRA PKLADGDPTP EGPRYTVVVS LPDGSLSAEA ELQIPSRFAA AFYGTVAENP TATSQPTATN TPVAQATPAP TPTPTIAPTP TLVAVQQVAV TNGGNVRKLP FTGVYNVIGG VNAGEQVQII ARTPNALWYY VRTVRDEVGW VSASLLAVTD LIAAETPVAN MVTVFVSGPI YLAADPASTQ IDRVERNEVV ELLERTADGM WYKVLNVRER EGWVQASLLG IPDDVAAQVP VAR
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