Gene Cagg_0967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0967 
Symbol 
ID7268041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1195584 
End bp1196069 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content57% 
IMG OID643565816 
ProductYbaK/prolyl-tRNA synthetase associated region 
Protein accessionYP_002462321 
Protein GI219847888 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0057885 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.753698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCA AACTCAACTC AATGCGTGTG CTTGAACGGC AGCAGATCCC CTACACTGTG 
CATGATTATG ATCCAACGCT ACCTGATGCG GTGGCAGTTG CCGAGGCAAT TGGTATACCG
GCCGCGCACG TGTTCAAGAC ACTGGTCGCC AAGAGTGATC GACCATTGTT AGCGATGGTA
CCGGCTCATT GCCAACTCGA TCTCAAGCGA TTGGCTGTAC TTGCCGGCGT GAAGCGCGTC
GAGATGGCTC CTCATGTCGA AGCTGAGCGG TTGACCGGAT TACGGGTTGG TGGTATTGGC
GCTTTAGCGC TCATCGCGAA ACGCTGGCCG TCGTATCTCG ATGAATCGGC GCTGGTGCCG
TCGAAGATCT ACGTCAATGC CGGGCAGCGG GGGGTGATGA TCGGGATCGC ACCGTCTGAT
TTGGTGCGGG TGGTCGGTGC AACGGTGGGA GCGATTACGG CTTGTGTATC ACCGTCGTCA
TCATGA
 
Protein sequence
MSGKLNSMRV LERQQIPYTV HDYDPTLPDA VAVAEAIGIP AAHVFKTLVA KSDRPLLAMV 
PAHCQLDLKR LAVLAGVKRV EMAPHVEAER LTGLRVGGIG ALALIAKRWP SYLDESALVP
SKIYVNAGQR GVMIGIAPSD LVRVVGATVG AITACVSPSS S