Gene Cagg_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0953 
Symbol 
ID7268026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1182344 
End bp1182730 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content57% 
IMG OID643565801 
Productnitrogen-fixing NifU domain protein 
Protein accessionYP_002462307 
Protein GI219847874 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACTT CGCACCAAGA TGCTATCGAA CGCTTGCTCG ATCATTACCG TCGCCCCCGC 
TACTATGGCG AACTCGCCGA TGCATTAACG TACAGTGGCG GTGTTCCTGA TTGTGGCGAT
ACGTTGACCG TCTATCTGCG TGTGGCGTCC GATGGTCGCT TAACAGCCCT TCAATTTACG
GGGCAGGGTT GTAGCGTGAG TCTTGGCACC GCATCAATCC TGATTGAACG GTTACAGGGT
GCGACCCTGG CCGATCTGGC TGCACTCGAT GAGGTGACCG CCATTGAGGT GGTTGGCCCC
GATATTCTGC AAGCGCGGCC ACAGTGTGCA ACATTAGCAT ACCGTGTGCT CAAGGCGGCG
GCCCAGATGG CGATGCGCCA AGCGTAG
 
Protein sequence
MTTSHQDAIE RLLDHYRRPR YYGELADALT YSGGVPDCGD TLTVYLRVAS DGRLTALQFT 
GQGCSVSLGT ASILIERLQG ATLADLAALD EVTAIEVVGP DILQARPQCA TLAYRVLKAA
AQMAMRQA