Gene Cagg_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0952 
Symbol 
ID7268025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1181380 
End bp1182309 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content57% 
IMG OID643565800 
ProductPyridoxal-5'-phosphate-dependent protein beta subunit 
Protein accessionYP_002462306 
Protein GI219847873 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID[TIGR01136] cysteine synthases
[TIGR01138] cysteine synthase B 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCCG AACTCCTCAA TCTGATCGGT CATACCCCTC TTCTACCGCT GCATCATGCT 
CTCGATTTAC CGGATGGCGT TGAGCTTTAC GGAAAAGCCG AATGGTACAA TCTCGGCGGT
TCGGTGAAGG ATCGTCCTGC GCTCTGGATG ATCCGTGATG GCGAGCAACG CGGCGCGCTG
CGACCGGGAA TGCGAATTGC CGACGCTACC AGCGGTAATA CCGGTATTGC CTATGCCACC
ATCGGCGCGG TACTGGGCTA CGGAGTGACG CTGGCGATGC CGGCGAACGC TAGCCTTGAA
CGACGCCGCA TCTTACGTGC GCTTGGCGCC GAACTTATCT TGACCGATCC GGCTGAAGGT
ATGGATGCCG CAATCGCTGC TATTCGTGCC TTGGTCGCCG AATATCCCGA TCGTTACTTT
TATCCTGACC AGTATAGCAA TCCGGCCAAC CCCCAAGCCC ACTACGAGAC CACCGGCCCC
GAAATCTGGC AACAGACTGA TGGTCGGCTT ACGCATTTTG TGGCTGCCCT TGGTACAAGT
GGTACCTTTA TGGGTACCAG CCGGCGATTG CGTGAGTACA ATCCGGCGAT CCGCATGATT
GCCGTTCAGC CTGATAGTCC GTACCACGCT CTCGAAGGTG TGAAGCACAT GGCTTCAACC
AAATTTGTGC CGGCAATTTA CCGTCCCGAA CAGGCCGATG AAGTGATTGA AGTGCGGAGC
GAAGAGGCGT TTGCGATGGC GCGATGGTTA GCGCGACGAA TCGGTCTGTT GGTCGGGATT
TCAGCAGCGG CGAATGTAGT GGCTGCGGCT CGAGTGGCTC GGGAGGCCGG CAGTGGGGTG
GTGGTCACCA TCCTGTGCGA TAGCGCTAAT CGTTACCTCA GCGAACGGTT CTGGGAAGAT
CCGGGGTTTG CTGAAGGGGC TGGCATTTGA
 
Protein sequence
MIPELLNLIG HTPLLPLHHA LDLPDGVELY GKAEWYNLGG SVKDRPALWM IRDGEQRGAL 
RPGMRIADAT SGNTGIAYAT IGAVLGYGVT LAMPANASLE RRRILRALGA ELILTDPAEG
MDAAIAAIRA LVAEYPDRYF YPDQYSNPAN PQAHYETTGP EIWQQTDGRL THFVAALGTS
GTFMGTSRRL REYNPAIRMI AVQPDSPYHA LEGVKHMAST KFVPAIYRPE QADEVIEVRS
EEAFAMARWL ARRIGLLVGI SAAANVVAAA RVAREAGSGV VVTILCDSAN RYLSERFWED
PGFAEGAGI