| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0932 |
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| Symbol | |
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| ID | 7268005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 1160567 |
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| End bp | 1162222 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643565780 |
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| Product | spermidine synthase-like protein |
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| Protein accession | YP_002462286 |
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| Protein GI | 219847853 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.624044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCAA AACAATTTGC GGTCGGTGAG CGATTGTTAC TCGCCGTCGT CTTTCTTGCC
GGGATCGGCA CACTCGGGAT CGAGATGGTG ATGCCGCGTA TGCTGGCCCC GTTTTTTGGT
ACCTCACAGC CGATCTGGGC AGTCGTCATT GGTATGACGC TCGTCTATTT GGCAATTGGG
TACCGGTTAG GTGGTCTCGT TGCCGACCGT CGTCCCGATT GGCGGTTGCT GTTTCAATTG
ATCGGTTGGG CCGGGCTGAG CTGTGCGGTT ATCCCGTTTA TCGCCCGTCC AATCTTGAGC
ACGGCCCAAG GCGCGTTGCG CAATGTCGCT GCCGGAGGGT TTCTGGCCGC GCTCATCGGG
GTCATCTTAC TGTTCGCAAT ACCGGTGACG TTAATGGCGA TGGTTAGTCC CTTTGCCATT
CGGTTGCAAC TGCGCTACGC CGCGGATATT GCGCGAGCCG GTCGCACTGC CGGTACGATT
TCGGCACTCT CAACAATTGG GTCGATTGTT GGCACCTTCC TCACCGTCTT GGTGCTGATT
CCGGCTATCG GTGTTGCCAG CACGCTGTTC CTCTTTGCCG GGTTCTTGGT TGTGCTCAGC
CTCATCGGGT TGCGCGATCC GCGTGGGCTA CTGTTGGTGA TAACGGTGGT TGTATTGGCC
GGCGCGTACC AACTTACAAC CGGTGTCATC AAAGCAGCCG ATTGTCGTAA TTGTCGCCTC
ATTGCCGAAT TCGAGTCGGA TTACAACTAT ATCCAAGTTG CCGAGCAAGA GATCACGTAC
AGTAATGGCG TGGTCGATCG GCGGCGTGTG TTGATCCTCA ACGAGGGCTT AGCGTTCCAT
TCGATCTACC GGCTTAAGTA TCGCGAAACC GGTGATCCGC TCGATCTCCT CACCGATGGT
GGGCCGTGGG ACTATTTCAC CGTTGCGCCC TACCTCTATC CCGATACCGA TCCGGCAGAT
GTTCGTTCGC TGGCCCTTCT CGGTGCCGCT GCCGGTAGTA TCGCCCAGCA GTTCTTAGCG
ATTTACGGTC CGGATACGAT CATTGATGCT GTAGAAATCG ACCGCACAAT CAGCGAAGTT
GGGCGACGTT ATTTTGATAT GGCCGATGGC AGCCCACAAG CACCTTACTT CACCACCTAC
AACGAAGATG CGCGGTATTG GCTGGCAACG ACTGACCGGC GTTACGACGT GATCGGGATG
GATGCCTACC ACCAGCCCTA TATCCCGTTT CACTTGACCA CCGTCGAGTT TTTTCGTGAG
GTCAAAGCCA AACTCAATCC GCGTGGCGTT GCAGTCGTCA ATGCCGGTCG ACCGGCGAGT
GGCGATGATC GGTTGGTGAA TGCCTTAGCA TCAACGATGT TAGCGGTCTT CCCCCAAGTG
TATATCATCG ATACACGCTT CAACAACGCG ATCATCATTG GGGTCAATCA ACCGGTCGGC
GATGGTATTG TTCATTTCAT CGAAAATGCC GCGCGCATTG ATATACCGGC GCTGCAATTG
GTGATGGCCT GGTCGCTCTA TGAAGGTCGG TTTGGGCCAC TGCGCGAATT CACGCCGGAG
ATGGCCCAGT TCCGTCCGTT TACCGATGAT CATGCCCCGG TTGAGCAATT GATCGACGGT
ATTATCTTCA GCGAAGCAAA TAAAATGGTG CGTTAA
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| Protein sequence | MTAKQFAVGE RLLLAVVFLA GIGTLGIEMV MPRMLAPFFG TSQPIWAVVI GMTLVYLAIG
YRLGGLVADR RPDWRLLFQL IGWAGLSCAV IPFIARPILS TAQGALRNVA AGGFLAALIG
VILLFAIPVT LMAMVSPFAI RLQLRYAADI ARAGRTAGTI SALSTIGSIV GTFLTVLVLI
PAIGVASTLF LFAGFLVVLS LIGLRDPRGL LLVITVVVLA GAYQLTTGVI KAADCRNCRL
IAEFESDYNY IQVAEQEITY SNGVVDRRRV LILNEGLAFH SIYRLKYRET GDPLDLLTDG
GPWDYFTVAP YLYPDTDPAD VRSLALLGAA AGSIAQQFLA IYGPDTIIDA VEIDRTISEV
GRRYFDMADG SPQAPYFTTY NEDARYWLAT TDRRYDVIGM DAYHQPYIPF HLTTVEFFRE
VKAKLNPRGV AVVNAGRPAS GDDRLVNALA STMLAVFPQV YIIDTRFNNA IIIGVNQPVG
DGIVHFIENA ARIDIPALQL VMAWSLYEGR FGPLREFTPE MAQFRPFTDD HAPVEQLIDG
IIFSEANKMV R
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