| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0670 |
|---|
| Symbol | |
|---|
| ID | 7266921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 828110 |
|---|
| End bp | 830446 |
|---|
| Gene Length | 2337 bp |
|---|
| Protein Length | 778 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643565531 |
|---|
| Product | regulator of chromosome condensation RCC1 |
|---|
| Protein accession | YP_002462041 |
|---|
| Protein GI | 219847608 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton |
|---|
| COG ID | [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00126758 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000346041 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACCACT ACACCATGCT GCGCTGGCTA CTGGTCGTAT CGGTCGTTGG GGGGATCCTG
TGGAGCACGC AGACCGGTCA CACGGCACCA ACGCCAACGA CCACGGAACC GCCATCAACA
ACCACACGTC TGCATACGTC GTCCTTCTCT CCGTTGCAGG GCGTCACGGC CATTGCAGCG
GGTGGCGCTC ACACCTGTGC GCTAACCGGC AGCGGCGGGG TGATGTGCTG GGGTGGCAAC
GACTTCGGGC AACTGGGCGA CGGGACGCCG ACCACCCGCA GCACGCCGGG GGCGGTGAGC
GGGCTACCGA GCGGGGTGAC GGCCATTGCA GCGGGTAATT ATCACACCTG TGCGCTGACC
GGCAGCGGCG GGGTGCGGTG CTGGGGCGCC AACTACAGCG GGCAACTGGG CAACGGCTTG
ACCTTTGGTA GAAGCACGCC GGGGGCGGTG AGCGGGCTAC CGAGCGGGGT GACGGCCATT
GCAGCGGGTG GCGATCACAC CTGTGCGCTG ATGAGCAGCG GCGGGGTGAT GTGCTGGGGT
GATAACTACT ACGGGCAACT GGGCGACGGG ACGACGACCA ACCGCAGAAC GCCGGTGGCG
GTCAGCGGGC TACCGAGCGG GGTGACGGCC ATTGCAGCGG GTGGCTTGCA CACCTGTGCG
CTGACCGGCA GCGGCGAGGT GTGGTGCTGG GGCTATAACT ACTACGGGCA ACTGGGCGAC
GGGACGACGA CATACTCCCG CAGCACGCCG GCGGCGGTCG GCGGGCTACC GAGCGGGATG
ACGGCCATTG CAGCGGGTGG CTTGCACACC TGTGCGCTGA TGAGCAGCGG CGGGGTGTGG
TGCTGGGGCC GCAACGACAG CGGGCAACTG GGCGACGGCT CGGACACCGA TAGCAGCACG
CCGGTGGCGG TCAGCGGGCT ACCGAGCGGG GTGACGGCGA TTGCGGCGGG TGATTATCAC
ACCTGTGCGC TGACCGGCAG CGGCGAGGTG TGGTGCTGGG GTGGCAACGG CTTCGGGCAA
CTGGGTGACG GGACGACGAC CGCCCGCAGC ACGCCGGCGG CGGTGAGCGG GCTACCGAGC
GGGGTGGAGA CCATTGCGGC GGGTGATTAT CACACCTGTG CGCTGATGAG CAGCGGCGGG
GTGTGGTGCT GGGGTCGCAA CAACAGCGGG CAACTGGGTG ACGGGACGAC GACCGCCCGC
AGCACGCCGG CGGCGGTGAG CGGGCTACCG AGCGGGGTGA CGGCCATTGC AGCGGGTGGC
TTGCACACCT GTGCGCTGAT GAGCAGCGGC GGGGTGTGGT GCTGGGGTCT CAACAACAGC
GGGCAACTGG GCGACGGCTC GGACACCGAT AGCAGCACGC CGGTGGCGGT GAGCGGGCTG
GCGAGCGGGG TGGAGACCAT TGCGGCGGGT GGCTGGCACA CCTGTGCGCT GACGAGCAGC
GGCGGGGTGT GGTGCTGGGG TCGCAACAAC AGCGGGCAAC TGGGCGACGG CTCGACGATC
TACCATATTA CGCCGGTGGC GGTCAGCGGG CTACCGAGCG GGGTGACGGC CATTGCAGCG
GGTGATTATC ACACCTGTGC GCTGACCGGC AGCGGCGGGG TGTGGTGCTG GGGATACAAC
CTCTCCGGGC AACTGGGCGA CGGGACAACG ACCGACCGCA GCACACCGGT GGCGGTCAGC
GGGCTGACGA GCGGGGTGAC GGTGATTGCA GCGGGTCGGT TTCACACCTG TGCGCTGACG
AGCAGCGGCG GGGTGTGGTG CTGGGGTGCC AACTTTGACG GGCAACTGGG CGACGGGACG
ACAACCAACC GCACCACGCC GGTGGCGGTG AGCGGGCTAC CGAGCGGGGT GACGGCCATT
GCAGCGGGTG GCTGGCACAC CTGTGCGCTG ACGAGCAGCG GCGAGGTGTG GTGCTGGGGT
GATAACTACT ACGGGCAACT GGGCGACGGG ACGACGACCA ACCGCAGCAC GCCGGGGGCG
GTCAGCGGGC TGCCGAGCGG GGTGACGGCC ATTGCAGCGG GTTGGGAGCA CACCTGTGCG
CTGACGAGCA GCGGCGAGGT GTGGTGCTGG GGTGATAACT ACTACGGGCA ACTGGGCGAC
GGGACGACGA CCAACCGCAG CACGCCGGGG GCGGTCAGCG GGCTGCCGAG CGGGGTGACG
GCCATTGCAG CGGGTGTCTA TCACACCTGT GCGCTGACCG GCAGCGGCGG GGTGATGTGC
TGGGGCAACA ATGGGGATGG GCAACTGGGC GACGGCAGAC CGCTGTATCG CACCACGCCG
GTGGATGTGG TGACTTCAGC GTCATGGGGA GTATACCTAC CGATGATTAT CAGATGA
|
|---|
| Protein sequence | MNHYTMLRWL LVVSVVGGIL WSTQTGHTAP TPTTTEPPST TTRLHTSSFS PLQGVTAIAA
GGAHTCALTG SGGVMCWGGN DFGQLGDGTP TTRSTPGAVS GLPSGVTAIA AGNYHTCALT
GSGGVRCWGA NYSGQLGNGL TFGRSTPGAV SGLPSGVTAI AAGGDHTCAL MSSGGVMCWG
DNYYGQLGDG TTTNRRTPVA VSGLPSGVTA IAAGGLHTCA LTGSGEVWCW GYNYYGQLGD
GTTTYSRSTP AAVGGLPSGM TAIAAGGLHT CALMSSGGVW CWGRNDSGQL GDGSDTDSST
PVAVSGLPSG VTAIAAGDYH TCALTGSGEV WCWGGNGFGQ LGDGTTTARS TPAAVSGLPS
GVETIAAGDY HTCALMSSGG VWCWGRNNSG QLGDGTTTAR STPAAVSGLP SGVTAIAAGG
LHTCALMSSG GVWCWGLNNS GQLGDGSDTD SSTPVAVSGL ASGVETIAAG GWHTCALTSS
GGVWCWGRNN SGQLGDGSTI YHITPVAVSG LPSGVTAIAA GDYHTCALTG SGGVWCWGYN
LSGQLGDGTT TDRSTPVAVS GLTSGVTVIA AGRFHTCALT SSGGVWCWGA NFDGQLGDGT
TTNRTTPVAV SGLPSGVTAI AAGGWHTCAL TSSGEVWCWG DNYYGQLGDG TTTNRSTPGA
VSGLPSGVTA IAAGWEHTCA LTSSGEVWCW GDNYYGQLGD GTTTNRSTPG AVSGLPSGVT
AIAAGVYHTC ALTGSGGVMC WGNNGDGQLG DGRPLYRTTP VDVVTSASWG VYLPMIIR
|
|---|
| |