Gene Cagg_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0520 
Symbol 
ID7267017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp641362 
End bp642411 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content54% 
IMG OID643565383 
ProductABC-2 type transporter 
Protein accessionYP_002461895 
Protein GI219847462 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1668] ABC-type Na+ efflux pump, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTAC GCCGCATTTT GGCCTTACTC TCTCGTGAGG TGGTGCAAGG GCCTAAGAAT 
TTCATTTTCA TCTTTACGAT CGTCGTCCCA TTAGGGTTGA GTCTGGCGCT TGGCCTGATC
TTTGGCACAT TTTTTAGCGG TAAGCCCCGC CTTGGGATCG TCGCTGCCGA TCAGTCGCGG
TTGATCCAAC TCGCCGAAGC CGTACCGGGG TTGATCGTGC GACACTATTC AACCGAAGCC
GAATTACGTG ACGCGACCGC ACGGGGTGCT GTGGATGTGG GAGTGGTCAT ACCCGTCGGT
TTCGATCAGC AGTTGGCTCA TAACGCAACA AGTGACTTGA CCGTCTTTGT TTGGGGCGAG
AGTTTGCTCC GCGATCGCAT TTTGATCGGC ACTGCATTGG CCGATTGGTT GCGCATATTG
GCCGGCCATG AGCCGCCGGT GACGATCAAG ACTACGCTGC TCGGTGCAAA CAATACGCTG
ACATGGCAGC AGCGTTTGTT GCCGTTGTTG GTATTGATGA CGGTTGTCTT TGGGTCATTG
ATGTTGCCGG CATCTTCGCT GGTGAGTGAG AAGCAGCACC GTACTCTGAC GGCGTTGTTG
GTTACGCCGG CTACCCGTGG CGAGATTTAT ATTGCGAAAG GGGTCTTCGG TGTCGGGTTG
AGCGTAGTGA TGGCGGTACT TGTGCTGGCG CTGAATGGGG CATGGAGCGA TCAGATAGGC
TTAGTGCTGC TGGTGCTGTT CCTCGGTGCA GTGTTGTCGG CGGAGTTTGG TATTCTGATC
GGCGCACTGG TTCGTGACAT TAATTCGCTC TTCGCTACTG TAAAAGCGCT CGGTTTGGTG
CTCTATGCAC CGGCTTTGAT TGCCCTTTTC CCTGAACTAC CTCAGTGGAT CGCCCAAATC
TTCCCAACGT TTTATATGGT TGATCCGGTG ATCGCGTTGG TGCAGCGTGG TGCAACCTTC
CCGGATATTG CCGGTCGGTT GGTTGTTTTA GTCGGTATGA TAGTGGGGGT TGCGGTGGCC
TTGCGTTTTG TCCGCGAACG GAGTGCTTAA
 
Protein sequence
MSLRRILALL SREVVQGPKN FIFIFTIVVP LGLSLALGLI FGTFFSGKPR LGIVAADQSR 
LIQLAEAVPG LIVRHYSTEA ELRDATARGA VDVGVVIPVG FDQQLAHNAT SDLTVFVWGE
SLLRDRILIG TALADWLRIL AGHEPPVTIK TTLLGANNTL TWQQRLLPLL VLMTVVFGSL
MLPASSLVSE KQHRTLTALL VTPATRGEIY IAKGVFGVGL SVVMAVLVLA LNGAWSDQIG
LVLLVLFLGA VLSAEFGILI GALVRDINSL FATVKALGLV LYAPALIALF PELPQWIAQI
FPTFYMVDPV IALVQRGATF PDIAGRLVVL VGMIVGVAVA LRFVRERSA