Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0474 |
Symbol | |
ID | 7266642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 584572 |
End bp | 585789 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643565337 |
Product | tetratricopeptide TPR_4 |
Protein accession | YP_002461851 |
Protein GI | 219847418 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.223886 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGCCG TTCGTCCGCA ACCATTAGGT ATCTTTGCAC TGCCCGCCGG CTACCTTATC TTACCACCGA GCGATGCACG TACCGCCGCC CCGGCGCTCG CGGCACTGCT CCGCGGCGCG CGCCCCGATG AGTGGCCACC AGAATGGAAT TTTTACGCTC ACGCACTAGA CGGCGACATT CAAGCAGCCC TCGCTGCTTT ACCGGCTTCG TCCGATCCGC TCACCCGCTA CAATCGCTAT GTACTCGATG GTGCGCCGGC CGATGATCTG ATCCTGAGCA CCCTCTTAAC CGGTGAGCTG GCCAGTTTAC AAGGTGTCGC TGCCTTTACG ATGGGCCATC GCAGCGAGCC ACCGCCACCG ACAGGCACAA CCGGTGAAGT GCGCGCACTC GTTTTAATTA CCCATGCCGC TGCCGCTATT GAATGCAACG ACATCCTCGC TGCCGATCAA GCATTCGCCG ATGCACTGGC CGCTGCCGTG AACGTATCGC CGGTGTTGGC CGGGTATATC GCTCTGAATC GTGCTGAACT GGCAATCCAA CACGGCGGTG AACTGTCCCT CATCACGCGC TGGCTGCAAC AAGCTCTCAA TCTGATCCCG GCGGAAAGCG GGGCTGAACA ACGCGCTCGG GCGGCCCTCC AGTTGGGCCA ACTGCTGCAC GAACATGCCA ATGGTCAGCG CGGCCCGCTT CAAGCCGCTG TGCGCTGTTA TCAAGAAGCA CTCCGTTTCT ATCAGCGGGA AACATATCCG CTTGAGTTTG CGTTTATCCA AAACAATTTG GCCTTGGCCT ATCTCGCTAT GCCGATGACC GAAGCCAGCG ACCGGTTGCG TGGTGCAATT GCGGTACAGG CGCTGCGCGC CGCACTCAGC ATCTACGACC CTGACCGGCA TCCTCGCGAG TGGGCCGGCG CACGTCTCAA TTTGGCTAAT GCGCTGCAAT ACGTTCATTC GGCGCACCCG GCTGAGCATT TACTCGAAGC AGTGGCAATC TACGAAGACT TGTTGCAACG CCGTGACTCG GCTACCGATC CGGCCGGCTA TGCACGTATT CTGGCTAATC TCGGCAACGC CCTTGCTCAT CTCGGTATCT TCGCCGAGGC GCGCGAGCGG TTGCGGCAGG CCGAGCACCT CTTTACCCAG ATCGGTGATG AGTCGGCAAT GATGACGGTA CGTGAACTAC TAGCGAATAT CGATCAGTAT GAGGCAGTGC AGCACTGA
|
Protein sequence | MIAVRPQPLG IFALPAGYLI LPPSDARTAA PALAALLRGA RPDEWPPEWN FYAHALDGDI QAALAALPAS SDPLTRYNRY VLDGAPADDL ILSTLLTGEL ASLQGVAAFT MGHRSEPPPP TGTTGEVRAL VLITHAAAAI ECNDILAADQ AFADALAAAV NVSPVLAGYI ALNRAELAIQ HGGELSLITR WLQQALNLIP AESGAEQRAR AALQLGQLLH EHANGQRGPL QAAVRCYQEA LRFYQRETYP LEFAFIQNNL ALAYLAMPMT EASDRLRGAI AVQALRAALS IYDPDRHPRE WAGARLNLAN ALQYVHSAHP AEHLLEAVAI YEDLLQRRDS ATDPAGYARI LANLGNALAH LGIFAEARER LRQAEHLFTQ IGDESAMMTV RELLANIDQY EAVQH
|
| |