Gene Cagg_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0452 
Symbol 
ID7266620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp558307 
End bp559485 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content47% 
IMG OID643565317 
ProductDNA-cytosine methyltransferase 
Protein accessionYP_002461831 
Protein GI219847398 
COG category[L] Replication, recombination and repair 
COG ID[COG0270] Site-specific DNA methylase 
TIGRFAM ID[TIGR00675] DNA-methyltransferase (dcm) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0206606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00155723 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGAATATT CCAGTTTTCC TCTTACAGTA GCCGAATATT TCGCAGGCAT AGGCCTGGTC 
AGGATGGGCC TACAATCCTA TGGTTGGAAA GTCATTTTCG CTAACGACAT CTCTAAAAAG
AAATTCGAGA TGTACAAAGC GTTTTTCCCC GACGCAGAAG CTCATTATGT GACAGCCGAC
ATTTTTGACA TTGACCCCAC TGTGGTTCCC CTCACAACCC TGGCAACTTG TTCTTTCCCT
TGCATTGACC TTTCGCTGGC CGGAAACATG CATGGAATGA TAAACGGCAA TCATTCGAGT
GCATTTTGGG GATTCATAAA AATACTAAAA CAACAAGGAG ACTCTGCGCC GCCGCTTGTT
CTTGTTGAAA ATGTACCAGG CTGGTTGTAC TCAAATAAAG GAATGGATTT CAGAATAACC
GTTCAGGCTC TCAATGAACT GGGCTATGCA TGCGATGTGT TTGCAGTTGA TGCTTTGCGC
TTTACGCCAC AAAGTAGGCT GCGGATATTC CTTGTTGGGA CTAGACTGCC GGTCAGTTAC
ACCACCATCG AACTAATACT AACGCGCCCG AAATCTTTAC TCCCCGACCA ACTCAAAAAG
AATATAATTG CCAACGAAGA TTTACGATGG TTTTATAATG AAATACCAGA GCCTCCTCCT
CTTAGAACCT CCGGTTTGTC CGAGATAGTT GAAACATTAG AAGACTCTGA TGACCGCTGG
TGGCCCGACG CTGAGGTGAA GCGTCACTTG GCTATGATGA AAGAAACCCA TCGCCAGAGA
GTTGAACAAC TGGCGCAAGG CCAGCAGTTT GCATACCGAA CTTTCTTTCG CAGACGGCGC
GATGGTCAGC AACGCGCAGA AGTGAGAGAC GACGATTTGT CTGGTTGTCT ACGTACTGCC
ATAGGCGGCA GCGGCAAGCA GTTTTTGATA AGGGCGGGGA AAGGTTCTAT ACGAATGCGC
GCTATGACGC CGAGAGAATA CGCACGTTTG CAAGGCGTAC CTGATGAATA TCCTATCACC
GTAAACGGCG TACAAGCTCT CACAGGATTC GGCGACGCAG TTTGCGTTCC AGTTATATCC
TGGATTGCTG AGCATGTTTT AAACCCTTTG GCCGAAAACG GTAGGCCACT ATATCGGTGG
CAGTTGCCTA CAGCGCAGAT GTTTTTGTTT GACAAATGA
 
Protein sequence
MEYSSFPLTV AEYFAGIGLV RMGLQSYGWK VIFANDISKK KFEMYKAFFP DAEAHYVTAD 
IFDIDPTVVP LTTLATCSFP CIDLSLAGNM HGMINGNHSS AFWGFIKILK QQGDSAPPLV
LVENVPGWLY SNKGMDFRIT VQALNELGYA CDVFAVDALR FTPQSRLRIF LVGTRLPVSY
TTIELILTRP KSLLPDQLKK NIIANEDLRW FYNEIPEPPP LRTSGLSEIV ETLEDSDDRW
WPDAEVKRHL AMMKETHRQR VEQLAQGQQF AYRTFFRRRR DGQQRAEVRD DDLSGCLRTA
IGGSGKQFLI RAGKGSIRMR AMTPREYARL QGVPDEYPIT VNGVQALTGF GDAVCVPVIS
WIAEHVLNPL AENGRPLYRW QLPTAQMFLF DK