Gene Cagg_0413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0413 
Symbol 
ID7266581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp511616 
End bp512782 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content53% 
IMG OID643565280 
Productanti-sigma-factor antagonist 
Protein accessionYP_002461794 
Protein GI219847361 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTAC GTGTACGCCT TCTCGTCTCA CTCTCTCCTC TGCTGGTGGC GTTAGCGATT 
ATTGGCGGAG TTGCCCTTTA CTCTCAGCAA CGGGTGGCTG CTGCAGTTGC CGCGGTTGAT
CGAAGTGCTC GCAATCTCGT TGAAGTGGCA CAAGGTGAGT CGCTCATCTT ACTCGAACAA
TACTATGTGA GCGAGATCAT CAACGGTCAT CAAGCGAGTC GGGGTGAGCT AGAGCGGATT
CGCCCGGAAG TACAACGGTT TTTTGGGAAC TATGCCTCAG TCCATGAAGG TTTTGTTGAA
CTTGAACTTG TAGCGCGTGT TGAAACGATG ATTGCTCAGC ACGATGCCGC CCTGACATTC
CTCGAACGTG GTGATCGTCA GCGGGCGCTA GAGCGGATTA GTAGTGTTGA TTATCACCGT
AATATTCGCG CCATTCATAG TTTGGCAGTC GGGGCACAGC GTGAATATGA AGCGCAGTAT
CTCGCGCGGA TTGCTGCCCT TGAGCAAATT ATTAATGAGG GTTTCTGGCT TGCGGCTACC
ATTGTCAGTG TATCAATCGC AATTGCCCTT GGCCTGGCCG TTTCGCTCAT CTGGCAGGTA
GGGAAGAGCG TTGATCGCCT CACGTTCGAT GCCGAACAAT TGGCGAAATC TGACACCTAT
GGTGTACTTA GCCAAATCAG TCCGATCAAC CAGCTCCAAC GGTTGCGCGA TGCGTTTCAG
CATCTGATCG ACGCCAATTA CCGGCGCCAA CAACAATTAA CCGCTGCATT GCAGGCACAG
CAAGCGCAGC TCGAACGCGA AGTGCAATTG CAGGCGACCA TCCGGGCCTT GAGCTTACCG
GTCACGGCGC TTGGCCCACA GACAATCTTT TTACCGCTCG TTGGGTATCT TGATGCCGAA
CGGAGTGCTC AGCTTGAGCA GACGGTCCTT AATGCAATTC AGCAACGACG AGCACGCGCG
GTGGTGATCG ATGTTCATGG GTTAGCAGCA GTTGACGAAT CAACAATGCA GAGTCTCATG
AGAGTAGGAC GCGGTGCTCA ATTATTGGGA GCGACCGCTA TTCTCGTTGG TGTTCGCCCA
AAACAGGCGC TTGCTTTCAC CGAATTACCC ACCGGTTTGT TTCGGTATGC CCGTGATATT
CCCTCGGCCC TGAGTCTCGT GAGCTAA
 
Protein sequence
MDLRVRLLVS LSPLLVALAI IGGVALYSQQ RVAAAVAAVD RSARNLVEVA QGESLILLEQ 
YYVSEIINGH QASRGELERI RPEVQRFFGN YASVHEGFVE LELVARVETM IAQHDAALTF
LERGDRQRAL ERISSVDYHR NIRAIHSLAV GAQREYEAQY LARIAALEQI INEGFWLAAT
IVSVSIAIAL GLAVSLIWQV GKSVDRLTFD AEQLAKSDTY GVLSQISPIN QLQRLRDAFQ
HLIDANYRRQ QQLTAALQAQ QAQLEREVQL QATIRALSLP VTALGPQTIF LPLVGYLDAE
RSAQLEQTVL NAIQQRRARA VVIDVHGLAA VDESTMQSLM RVGRGAQLLG ATAILVGVRP
KQALAFTELP TGLFRYARDI PSALSLVS