Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0413 |
Symbol | |
ID | 7266581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 511616 |
End bp | 512782 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643565280 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_002461794 |
Protein GI | 219847361 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCTAC GTGTACGCCT TCTCGTCTCA CTCTCTCCTC TGCTGGTGGC GTTAGCGATT ATTGGCGGAG TTGCCCTTTA CTCTCAGCAA CGGGTGGCTG CTGCAGTTGC CGCGGTTGAT CGAAGTGCTC GCAATCTCGT TGAAGTGGCA CAAGGTGAGT CGCTCATCTT ACTCGAACAA TACTATGTGA GCGAGATCAT CAACGGTCAT CAAGCGAGTC GGGGTGAGCT AGAGCGGATT CGCCCGGAAG TACAACGGTT TTTTGGGAAC TATGCCTCAG TCCATGAAGG TTTTGTTGAA CTTGAACTTG TAGCGCGTGT TGAAACGATG ATTGCTCAGC ACGATGCCGC CCTGACATTC CTCGAACGTG GTGATCGTCA GCGGGCGCTA GAGCGGATTA GTAGTGTTGA TTATCACCGT AATATTCGCG CCATTCATAG TTTGGCAGTC GGGGCACAGC GTGAATATGA AGCGCAGTAT CTCGCGCGGA TTGCTGCCCT TGAGCAAATT ATTAATGAGG GTTTCTGGCT TGCGGCTACC ATTGTCAGTG TATCAATCGC AATTGCCCTT GGCCTGGCCG TTTCGCTCAT CTGGCAGGTA GGGAAGAGCG TTGATCGCCT CACGTTCGAT GCCGAACAAT TGGCGAAATC TGACACCTAT GGTGTACTTA GCCAAATCAG TCCGATCAAC CAGCTCCAAC GGTTGCGCGA TGCGTTTCAG CATCTGATCG ACGCCAATTA CCGGCGCCAA CAACAATTAA CCGCTGCATT GCAGGCACAG CAAGCGCAGC TCGAACGCGA AGTGCAATTG CAGGCGACCA TCCGGGCCTT GAGCTTACCG GTCACGGCGC TTGGCCCACA GACAATCTTT TTACCGCTCG TTGGGTATCT TGATGCCGAA CGGAGTGCTC AGCTTGAGCA GACGGTCCTT AATGCAATTC AGCAACGACG AGCACGCGCG GTGGTGATCG ATGTTCATGG GTTAGCAGCA GTTGACGAAT CAACAATGCA GAGTCTCATG AGAGTAGGAC GCGGTGCTCA ATTATTGGGA GCGACCGCTA TTCTCGTTGG TGTTCGCCCA AAACAGGCGC TTGCTTTCAC CGAATTACCC ACCGGTTTGT TTCGGTATGC CCGTGATATT CCCTCGGCCC TGAGTCTCGT GAGCTAA
|
Protein sequence | MDLRVRLLVS LSPLLVALAI IGGVALYSQQ RVAAAVAAVD RSARNLVEVA QGESLILLEQ YYVSEIINGH QASRGELERI RPEVQRFFGN YASVHEGFVE LELVARVETM IAQHDAALTF LERGDRQRAL ERISSVDYHR NIRAIHSLAV GAQREYEAQY LARIAALEQI INEGFWLAAT IVSVSIAIAL GLAVSLIWQV GKSVDRLTFD AEQLAKSDTY GVLSQISPIN QLQRLRDAFQ HLIDANYRRQ QQLTAALQAQ QAQLEREVQL QATIRALSLP VTALGPQTIF LPLVGYLDAE RSAQLEQTVL NAIQQRRARA VVIDVHGLAA VDESTMQSLM RVGRGAQLLG ATAILVGVRP KQALAFTELP TGLFRYARDI PSALSLVS
|
| |