Gene Cagg_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0339 
Symbol 
ID7268440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp421998 
End bp422765 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content60% 
IMG OID643565207 
Productbeta-lactamase domain protein 
Protein accessionYP_002461721 
Protein GI219847288 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00080407 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0194254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATG CGCGCATCGT CTTGCTCGGT ACCGGCACCG GTCTTCCCGA TCCAGATCGA 
TCCTATACGC ATCTGGTGTG GGATGGGCCG GGCGGACCGT TGCTCATCGA TGTCGGTGGC
GAGAGCTACC GCCGGCTCCT CGCCGCAGGG ATCGATCCAC AACAGTTGCG TGGTGTGTTT
CTGACCCACA GCCACTGTGA TCATATTAAT GGGTTATCGG CGTTGATTTT CAGCTTGCGA
CTCGGCGGGC GTAACGAACC GCTACCGATC TACGGCCTTA CCTCCACCCT TGAGTTGGCG
TCAGGATATG TGATGGCAGC AGGTTTGGAA GAATGGGCCG CCTTGGCCGA CTGGCGACCG
GTTACTGCCG GTGAGCAGGT ATCCCTTGGC GAGGGTCTTG TGCTGGCAAC CGCAGGAACT
GCTCATAGCC GGCCATGCCT TGCCGTTCGG CTGAGCGCAC CCAACGTTAG CCCCGTCTGC
TATTCATCCG ATACCGAACC GTGTCCTGCG GTGACCGAAC TAGCGACCGG AGTCGACCTG
CTGATTCACG AGGCAACCGT GGCCGAACCC TTTGCCGGTC ATACGACACC GCGACAGGCC
GGTGCAGTTG CGGCAGCAGC CGGTGTGCAT CGTTTGGTGT TAGTCCACTT CAGCCCGCGC
TGGACGATGC CGGTTGCCCA GGCCCTGGTC GAAGTCGCGG CAGGCGGCTT CACCGGTGAG
GTGCAGGTAG GTATGGATAT GCAAGAACTG TTGGTATCGC AATCGTGA
 
Protein sequence
MQNARIVLLG TGTGLPDPDR SYTHLVWDGP GGPLLIDVGG ESYRRLLAAG IDPQQLRGVF 
LTHSHCDHIN GLSALIFSLR LGGRNEPLPI YGLTSTLELA SGYVMAAGLE EWAALADWRP
VTAGEQVSLG EGLVLATAGT AHSRPCLAVR LSAPNVSPVC YSSDTEPCPA VTELATGVDL
LIHEATVAEP FAGHTTPRQA GAVAAAAGVH RLVLVHFSPR WTMPVAQALV EVAAGGFTGE
VQVGMDMQEL LVSQS