Gene Cagg_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0287 
Symbol 
ID7267468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp357112 
End bp358431 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content58% 
IMG OID643565157 
Producthistidyl-tRNA synthetase 
Protein accessionYP_002461671 
Protein GI219847238 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0124] Histidyl-tRNA synthetase 
TIGRFAM ID[TIGR00442] histidyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTTA TTCAAAACGT GAAAGGAATG CGCGATCATC TGCCGACAGA TATGATGCTG 
CGGCAGTATA TCGTCAGTAC GCTTACCAGT ATCAGTGAAG CACACGGCTT CGAGCCTTTA
CAAACCCCGA TTATCGAGTA TGCCGAAACG CTTGAGGGTA AGCTTGGCGA GGATGAAAAG
CTGATTTACC GCTTTGAAGA TCATGGTGGG CGTCGGCTGG CGTTACGCTA CGATCAGACC
GTACCGCTTG CCCGTGTGAC TGCCCAATAT GCCGGACAGT TGACATTACC CTGGCGTCGC
TATGCCTACG GGCCAAGCTA TCGGGGTGAA CGGCCCGCGC GCGGACGCTA CCGTGAGTTC
TACCAGTTCG ATATCGATAT CGTTGGTAGT GCCTCGCCGT TGGCCGATGC CGAGATTGTC
GCAATGCTGT GTGAAGCGCT TTCGGCACTC GGCTTTCCTG ACTTTGTGAC CCTGCTCAAT
CACCGCCAGA TTATCGGTGG GATTGCGCGC GTCAGTGGTC TCTCAGAGGA AGCTGCCGGT
GGGGTCTATC GCGCCATTGA TAAGTTCGAC AAGATCGGTG TCGCCGGCGT CCGTAACGAG
TTGCTGAAAG CAGGCGTCGA TACCGGTGCT GCCGATCGGA TTCTCGAACT CGTGCAGATC
GACGGCTCCG CCGACGAGGT ACTCGCGGCA CTCGCCCAAC GTCTCGCCGA CGACGAGCGG
GCGGTCGCTG CGATTGCCAA TCTGCGTTCA ATCCTTGACA GTTTGGCTGC GATGGGGGTG
CCGACCGATC AATACCGCGT TGCGCCACGT CTCGCCCGGG GTCTCTCATA CTATACCGGT
GCCGTTTTTG AGGCAATCAC CCCGCACTGG CCAGAAGGTT CACTGCTCGG TGGTGGTCGG
TATGACGATC TGATCGGTCT GTTCGCCGGA CGTAACATCC CCACGGTAGG CCTTGCGTTC
GGTATCGACC GTCTCCACGA TGTGATGCTC GAACTCAACC TTGGCCCACG CCCGCGCACA
ACTGCGGTCG CGTATGTCAC CCTGTTTAGT GGAGATTACG TCGCAGCCAG CCTCGCTTTG
GCCGCCGAAC TGCGCGCTGC CGGAATACAT ACGCTCATCG CACTCGAACC GGGCAACCTT
GGTAAGCAAT TCAAAGAAGC CGATCGCCGT GGGGTTCGCT TTGCTCTCGT CCTTGGTCCC
GATGAGCTAG CACGTGACGA AGTGGTGGTG AAAGATCTCC AGCGTGGTGA GCAACGTTCA
CTCCCACGTG CCGCCGTTGC CGGTTTGCTG GCCGAAGCAC TTACAGAACA GGCGCGCTAA
 
Protein sequence
MAVIQNVKGM RDHLPTDMML RQYIVSTLTS ISEAHGFEPL QTPIIEYAET LEGKLGEDEK 
LIYRFEDHGG RRLALRYDQT VPLARVTAQY AGQLTLPWRR YAYGPSYRGE RPARGRYREF
YQFDIDIVGS ASPLADAEIV AMLCEALSAL GFPDFVTLLN HRQIIGGIAR VSGLSEEAAG
GVYRAIDKFD KIGVAGVRNE LLKAGVDTGA ADRILELVQI DGSADEVLAA LAQRLADDER
AVAAIANLRS ILDSLAAMGV PTDQYRVAPR LARGLSYYTG AVFEAITPHW PEGSLLGGGR
YDDLIGLFAG RNIPTVGLAF GIDRLHDVML ELNLGPRPRT TAVAYVTLFS GDYVAASLAL
AAELRAAGIH TLIALEPGNL GKQFKEADRR GVRFALVLGP DELARDEVVV KDLQRGEQRS
LPRAAVAGLL AEALTEQAR