| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0245 |
|---|
| Symbol | |
|---|
| ID | 7267425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 306962 |
|---|
| End bp | 309151 |
|---|
| Gene Length | 2190 bp |
|---|
| Protein Length | 729 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643565114 |
|---|
| Product | SSS sodium solute transporter superfamily |
|---|
| Protein accession | YP_002461629 |
|---|
| Protein GI | 219847196 |
|---|
| COG category | [R] General function prediction only
[S] Function unknown |
|---|
| COG ID | [COG4147] Predicted symporter
[COG4327] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03647] probable solute:sodium symporter small subunit
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAA GTTTCTGGCT CGGTCTTTTT CAACTTTTTC TGGTGGTTGG TGGTGCATTG
GCAGTGTCGC TGTTTATTAT TGACCGCCTG TTTCCACCGA TGCGCCAAGT CCAGGGGAAC
GTACCACCAA CGCTTCCGTC TGCGCCACCG GCGAGCCGTC CTACGACGGT TGTTCCACCA
TCGCAGCGTT GGCCGGCAGC CCCACCATGG CTAGCGCATT ACTGGCGAGA AAATCTCCAA
CTGGTCAGCC CTCTCCTCGT GATCTGGTTG TTGAGTTTTG TCTTGCCGGT TGTATTGGCG
GCGCCTCTCA ATCAGATTAG CGTTCTGACC GGCTTCCCGC TTGGTTACTA CATGGGAGCA
CAAGGTTCGC TAATCTGCTT TATCGTGTTA ACTATTGTCT ACAACTGGCG CATGCGTCTT
CTCGATCGCC GCTACGGGTT GGATGCACCA ACTACGCCCG AAGACCAAAC AATCCGCCGG
CGCTACTTGA CACGATATAT CATTTTTGCG ATTGGATTAT TGTTGTTGAT AGCATTATTC
TCCGTCCTTG AGACGTTCTT GAACATCCCT GCTGCTCTGA TCGACTGGAG TTTTCTCGCG
TTGGCAATTG GTCTGTATGC GATCATTGGT ATTCGTTCGC GGGCCAATAC GCTTGATGCT
TACTATGTCG CCGACCGCAA GATACCGGGT ATGCTGAACG GATTAGCGAC CGGCTCGGAC
TGGATGAGTG CTGCCTCGTT TATCAGTATG GCCGGTGCGC TCTATCTGCT TGGCTTTGAG
GGGTTGGCGT ACATTACCGG TTGGACCGGT GGCTATGTAT TGCTCGCTTT ACTCTTAGCG
CCATACATTC GCAAGTTTGG CCAATACACC CTCATCGATT TTATCAGTGC TCGCTATCCA
GGAGTAGGGG CGCGTGTTAT TGCTGCCATT CTCATCATTA TTATCTGCTT TACCTATGTT
ACTGCCCAAG TGACCGGGAT CGGCATTATT ATGAGCCGTT TTCTCGGGCT GAACTACATG
GTTGGGGTGA TTGTCGGGCT GGCCGCCGTC TTGCTCTGCT CCTACCTTGG TGGGATGCAG
GCGATTACCT GGACGCAGGG TGTGCAGGGG ATTATCCTCG TGGTTGCGTA TCTGGTGCCG
GTCACGTGGT TGTCGCAGAA ACTGACCGGG GTGGCGCTGC CGCAGGTGAT GTATGGTGAA
GCGCTGCGTA ACATTACTCG CCTGGAGGAG GCACAAAGCT TATCGAGTTA TATCACGCCG
TTTAACGATT GGTCGATCTG GAATTATCTC GCTTTGACCC TCTGCTTGAT GCTAGGGACA
GCCGGGATGC CCCATATTCT GGTCCGTTTC TACACCGTAC CGACGGTGCG CGATAGCCGG
AGCAGTGTTG CATGGGCGTT AGGCTGGATT TGCGTACTCT ACCTGACCGC ACCGGCGTAT
GCGGCCTTCT CACGCTGGGA GATCCTTAGT TTGGTCGTTG GACAACCGAT CACCAACTTG
CCCGATTGGG CCAATCGTTG GGCGACAACC GGATTGCTGG CAATTGCCGA TCATCCTGAT
ATGGGGGGAA ATGGTGATGG TGTCTTGCAA TATAACGAGC TAAAGATCGA TCAAGATTTA
GTTGTCTTGG CGACTCCGGA GATTGCTGAA TTGCCGGCAA CGGTCGTGGC ACTGGTCGCG
GCAGGCGGTA TCGCTGCCGC GCTTAGTACC GCCGATGGGT TGCTCATGGT CATTGCATCG
GCAGTAACCC ACGATATTTA CCATCGTGCG TTGAATCCAC GTGCCGGTTC GCGTGAGCGC
CTGCTCTTAG GCCGGCTAGC GATCTTAGTC ATCGCGATTT TGGCCGCTTT GACTGCACTA
CAGCGATTGA CCATTATTGT GCAGTTGGTG GCGTGGGCAT TTTCATTTGC CGCTGCAACC
ATCTTTCCGG TGTTAGTGTT GGGTATCTTC TGGCGACGTG CCAATAGTTA CGGCGCAATA
GCCGGAATGA TCGGTGGTTT TTTAGTGACG GCGGTATACA TGATGATCAG CTATATCAAC
CCCGATTGGA CGATCTTGGG TATTTCAAGC TCGGCTGCCG GGATTTTTGG CTTGCCGGTC
AACTTTTTGG TAACGTGGTT GGTTAGCCGG TATACACCTC CGCCTAGCCC GGAAGTACGC
GCGCTGGTTG ATTATGTGCG CTACCCGTAG
|
|---|
| Protein sequence | MNTSFWLGLF QLFLVVGGAL AVSLFIIDRL FPPMRQVQGN VPPTLPSAPP ASRPTTVVPP
SQRWPAAPPW LAHYWRENLQ LVSPLLVIWL LSFVLPVVLA APLNQISVLT GFPLGYYMGA
QGSLICFIVL TIVYNWRMRL LDRRYGLDAP TTPEDQTIRR RYLTRYIIFA IGLLLLIALF
SVLETFLNIP AALIDWSFLA LAIGLYAIIG IRSRANTLDA YYVADRKIPG MLNGLATGSD
WMSAASFISM AGALYLLGFE GLAYITGWTG GYVLLALLLA PYIRKFGQYT LIDFISARYP
GVGARVIAAI LIIIICFTYV TAQVTGIGII MSRFLGLNYM VGVIVGLAAV LLCSYLGGMQ
AITWTQGVQG IILVVAYLVP VTWLSQKLTG VALPQVMYGE ALRNITRLEE AQSLSSYITP
FNDWSIWNYL ALTLCLMLGT AGMPHILVRF YTVPTVRDSR SSVAWALGWI CVLYLTAPAY
AAFSRWEILS LVVGQPITNL PDWANRWATT GLLAIADHPD MGGNGDGVLQ YNELKIDQDL
VVLATPEIAE LPATVVALVA AGGIAAALST ADGLLMVIAS AVTHDIYHRA LNPRAGSRER
LLLGRLAILV IAILAALTAL QRLTIIVQLV AWAFSFAAAT IFPVLVLGIF WRRANSYGAI
AGMIGGFLVT AVYMMISYIN PDWTILGISS SAAGIFGLPV NFLVTWLVSR YTPPPSPEVR
ALVDYVRYP
|
|---|
| |