Gene Cagg_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0236 
Symbol 
ID7269150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp295489 
End bp296493 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content56% 
IMG OID643565105 
Producttranscriptional regulator-like protein 
Protein accessionYP_002461620 
Protein GI219847187 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGAAAC CGCGTTCGCG CCGTGGTCGC GGTCAGAAAC GGAGTTCGGC CTTAACCGTG 
CAGCGCCGGT TATGGCTGGT GAGTCGCTTT GTTCGCAGCC CGGCAACTCC GGCTGAACTC
ATTGCCGATG CACGCCGTGC CTTCGGTGAA TCGATCTATC CACCAAATGC ACTGGTCGCC
CTTCGTCACG ACTTCAACGC TTTGCGCAAC GAGTTTCTGT GCGAGATCGT ACGTCAACCC
AACGGCAGCT ATGCCCTGAC CGATTTTGGT CGCTTGACCC TCCTCAATAT ACCTGACGAC
GAGCTTGAGG CGCTGGCGTT TCTCGTCTCT TTTTTCGGTG AGGAAAGCTG GCCAAATAGC
CACCAAATCC GTTCGTTACT CGATCACATT ATCGCGCTCT TACCGCCTGA GCGACGTCAG
AACCTTGATC GGCAGCACAA CGTTGAGATT GAACTCCCGC AGAGCAGTAC GAGTATCGAT
CCGAACCTGC TGAACCGGCT GCAACGTAAC TTGCGTCGGT ATGCCATACG GTTTCTCTAC
CGGTCAAATT TTAGCAACGA ACCGGAAGAG CATCGGGTAG CTCCGGCCCG TCTATTCTTG
CGCGATGGGC ATACCTACCT CGAAGCCTAT TGCTACAACT CACCCCATCA GGCAACGATA
GGCCGCTATA TTCCGTATCG CGTTGATCGG ATCATCCCCG AATCGCTCCA TGTTGAGCGG
CGGGTATTAC CACCTGAACT CCCACCGCGT CGGATGTGGA CGCTCCGTTA TCGGTTATCG
CCGCAAGTGG CGCGGAACCG CGATATTGCG CTCTGGTTCC CCAATAGTGA AGTTACCTAT
TATCTCGACG GTAGTGCCGA GGTGACGGCC CAGACCGGCG ATCTCTGGCA GGCCGAACAG
ATTCTCCTCC GCTATCGTGA GCATTGCCGT GTCCTTGAAC CACCTGAACT TGTTGAGATG
ATCCGACAGA CGATCGAACG AATGCGTACC TTGTACGATG TGTGA
 
Protein sequence
MVKPRSRRGR GQKRSSALTV QRRLWLVSRF VRSPATPAEL IADARRAFGE SIYPPNALVA 
LRHDFNALRN EFLCEIVRQP NGSYALTDFG RLTLLNIPDD ELEALAFLVS FFGEESWPNS
HQIRSLLDHI IALLPPERRQ NLDRQHNVEI ELPQSSTSID PNLLNRLQRN LRRYAIRFLY
RSNFSNEPEE HRVAPARLFL RDGHTYLEAY CYNSPHQATI GRYIPYRVDR IIPESLHVER
RVLPPELPPR RMWTLRYRLS PQVARNRDIA LWFPNSEVTY YLDGSAEVTA QTGDLWQAEQ
ILLRYREHCR VLEPPELVEM IRQTIERMRT LYDV