| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0230 |
|---|
| Symbol | |
|---|
| ID | 7269144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 287200 |
|---|
| End bp | 288570 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643565099 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_002461614 |
|---|
| Protein GI | 219847181 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCGT CTCCCATTGC CGCTTTGCCC GGCCAGGCGC CAGGGCCGCG CCTAGCCTTT
GCCGGTGATC GCCAACGCCC CGACGAAATC GCCGAGTCGC TGGCGGCGCT AGCTAATGCT
CACGGCGGCG CGCTGGTGAT CAGCGGCGGA CGCGGCTCGC AACTCGCCCC CCTGCGCGAT
CCGGCCGCCG CTATTGAGCT GGCGTTATCG GCAGCGCTGG CTTGCACGCC TCCACTGATT
ATCCCACTGC CCCAAGTCGT TGTCTACCAT GATATGCCCG TTGTCGTCGT GGAAGTTCCT
GCCGGATTAC CTTATGTCTA TTCTATCAAT GGCCGCTACT TACGCCGCGA AGGGGACAGC
AACCAGCCGT TGTCACCGGC AGCACTCCAC CGCCTGTTTA GCGAGCGGGC AGAACTGGGC
TGGGAACGGC AGGTGCCACT CGGCGCCTCC TTCGCCGAAC TCGATCCTGA CCTCATCACC
GCCTACGCGC GCCGAGTCGG TCCACCTGCC GGCGACGACC CAATGACTCT GCTAACCCGT
CGTGGCTGCC TCATCGATAA CCGGCCGACG AATGCCGGTC TTCTGCTCTT CGGACGCGAT
GTGGCTGTTC GTTTTCCCCA AGCCGAAATT ACCCTTGTGC GCTACCGCGG TCGTGAGCCG
GACGATGTCT TCGAGCGTGC CGATATTTGC GCGCCATTGC CTGACGCTAT CCGTCGTGCC
GAGCGTTGGC TTAACGATCA TATGCGCAAA GGTTCGCGGA TGATCGGCCT TGAACGCGAA
GACTGGACGC AATTCCCACC GGCGGCTGTG CGTGAGGCAT TGGTCAATGC GGTTGCCCAT
CGCGATTATG CAGCACGTGG CGAAGGAATT CGTATTACCC TCTTCAGCAA CCGACTCGAA
GTCTATTCAC CCGGTCGTCT CCCCGGGCAC GTCACTCTCG ATAATATTCG CGCCGAACGG
TTTTCGCGCA ACCCGGCTAT CGTGCAAGTC CTCGCCGATC TCGGTCTGGT CGAACGACTC
GGCTATGGTA TCGACCGCAT GCTGCGCCAC CTGGCTGCTG CCGGCTTACC ACCGGCTACT
TTCCACGAGA CTGCTGCCGG TTTTTTAGTG ATCTTGCCCG GTCACCCATT CGCCGAGGAA
CTCCCCGGTG GGATTGATAC GACGGCATGG CGACGAATGG GGTTGAATGA TCGTCAGATC
AGCGCGCTCC TCTTCGTCGT TGAACAGCAA CGGATCACCA ATCGCGATCT GCAAGAGATG
CATCCTGACG TTAGCCCAGA GACGATTCGC CGTGATCTAT CCGATCTTGT GGCCCGTGGG
TTACTTTTAA AGGTGGGAGA TAAACGCGCA ACCTATTATA TTCTGAAGTA A
|
|---|
| Protein sequence | MESSPIAALP GQAPGPRLAF AGDRQRPDEI AESLAALANA HGGALVISGG RGSQLAPLRD
PAAAIELALS AALACTPPLI IPLPQVVVYH DMPVVVVEVP AGLPYVYSIN GRYLRREGDS
NQPLSPAALH RLFSERAELG WERQVPLGAS FAELDPDLIT AYARRVGPPA GDDPMTLLTR
RGCLIDNRPT NAGLLLFGRD VAVRFPQAEI TLVRYRGREP DDVFERADIC APLPDAIRRA
ERWLNDHMRK GSRMIGLERE DWTQFPPAAV REALVNAVAH RDYAARGEGI RITLFSNRLE
VYSPGRLPGH VTLDNIRAER FSRNPAIVQV LADLGLVERL GYGIDRMLRH LAAAGLPPAT
FHETAAGFLV ILPGHPFAEE LPGGIDTTAW RRMGLNDRQI SALLFVVEQQ RITNRDLQEM
HPDVSPETIR RDLSDLVARG LLLKVGDKRA TYYILK
|
|---|
| |