Gene Cagg_0177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0177 
Symbol 
ID7269092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp227414 
End bp228466 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content58% 
IMG OID643565049 
ProductparB-like partition protein 
Protein accessionYP_002461564 
Protein GI219847131 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000490694 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000221359 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGCTAC TCTACCTCGA TCCACGCCAA TTGGAGATCG ATCCGGCCGG AGTACGCGAG 
GAGCCGGGTG ATGTGGCCGG ATTAGCGGCT ACAATCGCTG AATATGGGCT GTTGCAGCCG
ATAGGGGTGA CGCCGATCGG GAGCGGGCGC TACCGAGTGG TGTACGGCGG AAGACGACGG
GCCGCGGCGA TCCAGCTTGG CCTGAGTAAA GTGCCGTGCA TCGTCCTCGA TAACGATGAC
CCCGACCTGC TCTTACGCCA ATTGATCGAA AATGTGCAGC GGCAAGACCT CAACGATATT
GAGCAGGCAC GCGCGTTTGC CCGTCTGCGT GAGCATATCG TTGCCACACG CGGCAAACTT
CCCGATAGCG AACTCGATGA GGCAGTGGGG CAGGCGGTAG GTCTAGGGGC ACGGACGGTG
CGTCGGTATT TAGGTCTGCT TGAGCTACCT GAAGAGGTGC AACAGATGAT CCGGCGTGGT
GAACTGAATG TGACCCAGGC CCAACATCTG CGCCGCATCA CTAATCCGAA AACCCAGATT
GAATTGGCCC GCTTTGCCGT TGAAGAAGGG ATGTCGGCGA CCGAACTGAG TCGGCTTACC
ACGTATTTCG CCGCGAATCC GAACTTGACC CTCGAAATCG CGCTACAGGC TCTCGAACAG
GGTACTGAGT TGCGGACGAA AGCGACGCCA GACGTCGGTG GTGGTGGGCC GCTGCACCAC
ACATCGGTGG CAACAGCCGA TCTGACGGCG GATGATGAAG AGTGGGAACA AGCGGAAGCG
AGCGCCGACG AGTACTTGAC AGTGGTCGAA GAGACGATTG AAAACCAGCC TAAAAACAAA
GCGCGGGTGT TTCGCATTCG TTCACTCGAC CAGATGGTTG ATGAAAGCGA TCGGCTGGTT
CGTGCCGTTT ACGATGGCGA TCTGGCAAAA TGGATCGAAC GCGACGAAGG GGCAGTGTTC
AAAGTACGCC TACTCTTGCG TCAGCTTGAA AGCCTGACGC GCGCCCTGCG CGATCTTGCT
CGTCAGCACA ACCTGTCAAT CGATGACGAG TAA
 
Protein sequence
MQLLYLDPRQ LEIDPAGVRE EPGDVAGLAA TIAEYGLLQP IGVTPIGSGR YRVVYGGRRR 
AAAIQLGLSK VPCIVLDNDD PDLLLRQLIE NVQRQDLNDI EQARAFARLR EHIVATRGKL
PDSELDEAVG QAVGLGARTV RRYLGLLELP EEVQQMIRRG ELNVTQAQHL RRITNPKTQI
ELARFAVEEG MSATELSRLT TYFAANPNLT LEIALQALEQ GTELRTKATP DVGGGGPLHH
TSVATADLTA DDEEWEQAEA SADEYLTVVE ETIENQPKNK ARVFRIRSLD QMVDESDRLV
RAVYDGDLAK WIERDEGAVF KVRLLLRQLE SLTRALRDLA RQHNLSIDDE