Gene Cagg_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0078 
Symbol 
ID7268046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp108272 
End bp110380 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content61% 
IMG OID643564951 
Productglycoside hydrolase family 3 domain protein 
Protein accessionYP_002461467 
Protein GI219847034 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACA TCGAAGATCG CATCAACCAC CTCTTGGGGC AAATGACTCT CGAAGAGAAG 
ATCGGCCAGC TTAACCAACC GATGATCCAT GGCCTACCGG GCCTCGACCT GTTACGGCAA
GGCCAAGCCG GTTCGATCAT CAACGCCTTC GGCGCGCTCA GCGGGCAAGG TTTCGATCAT
CTGAGCAGCG CCGAGCAGTG TAATGCGCTG CAAAAAGCCG CCCTCGAATC ACGTTTGGGC
ATTCCGTTGC TCTTTGGGCG CGACATTATT CACGGCCAAC GCACCGTCTT CCCGATCCCG
CTGGCGCAGG CCGCCAGTTT CAATCCAACA TTGATCGAAA CCGTCAACCG CATCGCCGCC
CGCGAAGCCA GCGCAGTCGG GATTCGCTGG ACCTTTGCCC CAATGTTGGA CATCGCCCGC
GATGCGCGCT GGGGCCGCAT CGCCGAAGGC TATGGCGAAG ACCCCTACCT GACTTCGCGC
ATGGCCGAGG CAGCGGTGCG TGGATTCCAA GGTGATGATG TCAGCCAGCC CGACCGCTTG
GTCGCCTGCG CCAAACATTA TGTTGGCTAT GGCGCTGCCG AAGGCGGGCG CGACTATGAA
CAAGCGGAAA TTTCTGAACC AACCCTGCGA GACGTTTACT TGCCGCCATT CCGGGCTGCC
GTCGCTGCCG GCGTCGGCAC CGTGATGAGC GCCTTCCTCG ACCTCAACGG CATCCCAGTC
ACCGCCAACC GCCGGCTCTT GACCGATGTC CTGCGCGGCG AATGGGGTTT CGACGGTTTC
GTCGTCTCGG ATTGGGAGTC GGTTGGAGAA CTAGTGCAGC ACGGCGTGGC CGAAGATCAG
GCGCATGCAG CGGCGCTCGC CTTGCGCGCC GGGGTTGATA TGGATATGGT GAGCGGCGCG
TATCAGACCA CGCTGGCCGA AAACTTGCAC CAAGGCCGGA TCACGCACGC CGAAATCGAC
GAAGCGGTGC GGCGCATCTT GCGTATCAAA TTCCGCGCCG GCATCTTCGA GCGGCCCTTT
ACCGATCCTG AACGTGCCCA ACGTGACATC CTCACCCACG ACGCGCGCGC GTTCGCCCGC
CAAGCGGCCC GTGAAACGAT GGTGCTGCTC AAGAACGAAC ACCACCTCCT GCCGCTGCGC
GACTTCCGCC GCATCCTCGT CGCTGGGCCA TTTGCCCACG CCACCGCTGA ATTGTTCGGC
ACGTGGACGA TGGATGGGCG GGCCGAAGAT GTGACGCCGC TCGATCGGGC ATTTCAAGAG
GTGGCGCCAG CGGGGGTCGA GTTGTGGTTC GCCGCTGCGC CTGATTTAGC CCTGTCCCGC
GCTCACTATG CCGATGTGGT AGTCTTGCTA GTGGGTGAAC ATCCCGCCCG TTCCGGCGAA
AACGCCAACG TCAGCGACCT TGGGCTGCCG CCGGGACAAC TCGAATGGAT CACGGCCATG
GCTGCAATCG GCAAACCAAT CGTGCTGGTC GTCTTTGCCG GCAGACCACT GGCGATCACC
CGCGCCGTAG CACAGGCGCA AGCGGTGATT TACGCTTGGC ATCCGGGGAT TGAGGGTGCA
GCGGCACTGG CCGAGATTCT ATTTGGCCTG GCTGCGCCGT CCGGTCGGTT GCCGGTGAGT
ATGCCCCGCA CGACCGGCCA AGCCCCACTT TACTATAATC GTAAATCATC AGGACGCCCT
CTACTCGATG ATGGCCCCTT CCGTACCCGC TATATCGATA CCCCGACCGC GCCGCTATTC
CCCTTCGGCT ACGGCCTCAC CTACACCCGC TTCACCTACA GCGATCTGCG TCTGAGCAGC
TCACGGATGC GCGACACGCT AGAAGTGAGT GCGCTCATCA CGAACGTTGG CGAATGGATC
GGTACCGAAG TAGTCCAACT CTACGTGCGC GATCTGGTGG GATCGCTCAC CCGCCCGGTG
CGCGAACTGA AAGGCTTCCA GCGCATCACC TTGCCACCCG GCGCAACGCA GCGGGTCACA
TTTACGTTGT GCGAAGCGGA CTTAGCCTTC ACTCGCGCCG ATGGCAGTTG GGGAACCGAA
GCGGGCCGAT ACAAGGTTTG GATCGCACCT CACAGTGAAA GTGGTCTCGA AGGTGAATTT
GAACTCTAG
 
Protein sequence
MNHIEDRINH LLGQMTLEEK IGQLNQPMIH GLPGLDLLRQ GQAGSIINAF GALSGQGFDH 
LSSAEQCNAL QKAALESRLG IPLLFGRDII HGQRTVFPIP LAQAASFNPT LIETVNRIAA
REASAVGIRW TFAPMLDIAR DARWGRIAEG YGEDPYLTSR MAEAAVRGFQ GDDVSQPDRL
VACAKHYVGY GAAEGGRDYE QAEISEPTLR DVYLPPFRAA VAAGVGTVMS AFLDLNGIPV
TANRRLLTDV LRGEWGFDGF VVSDWESVGE LVQHGVAEDQ AHAAALALRA GVDMDMVSGA
YQTTLAENLH QGRITHAEID EAVRRILRIK FRAGIFERPF TDPERAQRDI LTHDARAFAR
QAARETMVLL KNEHHLLPLR DFRRILVAGP FAHATAELFG TWTMDGRAED VTPLDRAFQE
VAPAGVELWF AAAPDLALSR AHYADVVVLL VGEHPARSGE NANVSDLGLP PGQLEWITAM
AAIGKPIVLV VFAGRPLAIT RAVAQAQAVI YAWHPGIEGA AALAEILFGL AAPSGRLPVS
MPRTTGQAPL YYNRKSSGRP LLDDGPFRTR YIDTPTAPLF PFGYGLTYTR FTYSDLRLSS
SRMRDTLEVS ALITNVGEWI GTEVVQLYVR DLVGSLTRPV RELKGFQRIT LPPGATQRVT
FTLCEADLAF TRADGSWGTE AGRYKVWIAP HSESGLEGEF EL