Gene Dhaf_4935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4935 
Symbol 
ID7261967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp5259150 
End bp5259563 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content48% 
IMG OID643564848 
Productsingle-strand binding protein 
Protein accessionYP_002461365 
Protein GI219670930 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00000213626 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAACC GGGTTGTTTT AATAGGCCGT TTAACGAAAG ACCCCGAGTT ACGTTATACC 
CCGAACGGAG TTGCGGTGGC CAGCTTTAGC TTAGCTGTGG ATCGCAATTT CAAGAATGCT
AACGGGGAAC GGGAAGCGGA TTTTATTCCA TGTGTAGTAT ATAGACAACT GGCTGAGCTT
TGTGCGAATT ATCTTGCCAA AGGTAAATTA GCAGCTGTCG ACGGGCGGTT GCAGGTTCGC
ACTTATGATG CTCAAGATGG GCAACGCCGT TGGGTTTATG AGGTCGTCGC TGAGAACGTG
CGCTTCCTTA GTCCCAAAGA TGGCGGAAAT TCCGGATATG GAGCATCTTC AGGAGCCAGT
GATGCAGGGA CTTATGGTCA TGAAGTGAGC TTAGATGACG ATATCCCATT CTAA
 
Protein sequence
MLNRVVLIGR LTKDPELRYT PNGVAVASFS LAVDRNFKNA NGEREADFIP CVVYRQLAEL 
CANYLAKGKL AAVDGRLQVR TYDAQDGQRR WVYEVVAENV RFLSPKDGGN SGYGASSGAS
DAGTYGHEVS LDDDIPF