| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4812 |
|---|
| Symbol | |
|---|
| ID | 7261841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 5138913 |
|---|
| End bp | 5139953 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643564723 |
|---|
| Product | Baseplate J family protein |
|---|
| Protein accession | YP_002461243 |
|---|
| Protein GI | 219670808 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3299] Uncharacterized homolog of phage Mu protein gp47 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 71 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAA CGATTACTCC TGAAAGTATC AAAGAAAATA TCCTAAATGA ACTTGCGCTG
GTAGATGTCC GGGAAGGAAG CTATACGAAT AATCTTGTCA GCCCGACTGC TTTAGCAATC
TGGAAGCTTT ACGACAGCTT GAATGCTCTT ATTCCCATGG TCTATGTGGA TGAGACCTCC
GGAGTATATA TTGACAAAAA GGCTGCCCAT TATGGGATCA CCAGAAAATC CGGTACAAAG
GCTACCGCAG TGCTGCACTT CACAGGAGTT GACGGTAAGG TGGTTCCTAA AGGGACGGTT
TTTCTAACAG GTGACGGCCT GGAATTTGTG ACTGAGTCGG CGGTTACGAT CACCGCCGGA
GCAGCCCGCA CCACAGCCAT AGCGGCTGAA GCAGGCGAAG CCTACAATGT TCCCGGCGGC
AGCATTACTC AGCAGATTGT CAGTATCTCG GGACTTACCG GCGTAACCAA TGATGCTGCT
GTCGGGGGCA CAGACCCGGA AAGCGATAAA AGCCTGGTCG AAAGGCTCTA TGCCTATCTT
CGCAAGCCGG CAACCAGCGG CAATGTTTAC CATTATGAAC AATGGGCTTT GGCTGTTGAT
GGTGTGGGAG GGGTAAAGGT AGCTCCCCTC TGGAATGGAC CGGGCACGGT TAAGGTCCTG
ATCGTAAGCC CTGCTAAAGC TCCTGTGGAT CAAGAGGTTG TGACCCGTTG CGCTGACCAT
ATCCAACAGA ATAGGCCCAT TGGAGCGGCG GTGACAGTAG AAAGCGCCTC GGCACTTATG
ATTAACGTAG AGGCAACAAT TACTATTGAA AGTACAACCA CCAAGTCCGC GGTGAAGGAA
GCTTTCGCGA ACAGCTTGAA CGCTTATTTG CAGAGCATTG CTTTTGAAAA GTACGAATTG
ATTTACAATC GCCTTGCTTT TATGCTCCTG GATATCGAAG GTGTCATTGA CTATGAGGAT
CTAACCGTCA ATGGCGGAAC ATCAAATATT ACCATCGCCG CTAATGAGGT CCCTGTAGCA
GGAATGGTGG TGATCAGTTA A
|
|---|
| Protein sequence | MFETITPESI KENILNELAL VDVREGSYTN NLVSPTALAI WKLYDSLNAL IPMVYVDETS
GVYIDKKAAH YGITRKSGTK ATAVLHFTGV DGKVVPKGTV FLTGDGLEFV TESAVTITAG
AARTTAIAAE AGEAYNVPGG SITQQIVSIS GLTGVTNDAA VGGTDPESDK SLVERLYAYL
RKPATSGNVY HYEQWALAVD GVGGVKVAPL WNGPGTVKVL IVSPAKAPVD QEVVTRCADH
IQQNRPIGAA VTVESASALM INVEATITIE STTTKSAVKE AFANSLNAYL QSIAFEKYEL
IYNRLAFMLL DIEGVIDYED LTVNGGTSNI TIAANEVPVA GMVVIS
|
|---|
| |