| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4755 |
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| Symbol | |
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| ID | 7261784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 5078908 |
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| End bp | 5080779 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643564666 |
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| Product | helicase domain protein |
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| Protein accession | YP_002461186 |
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| Protein GI | 219670751 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4098] Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000089196 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTACG TTTTTGTTGC CGATTCAGGG GAGATGACAC TTTCCCCTTT AATAGACGAT
AAGCACTTGG CTGAGGAGGC TGAGGTCTTG CGGCCCGGGC TCCCTTTAAG CTTTGCCCAA
TCCCTGCTGG GAGAGATTGA CGAGCAAAGG CAGGGCTCAG GAAGAGGCGG CGTATGGCCC
TTATGGGGAG GCTATTCAAG AGAAAGGGGA GAGGACAAGA AGCGGGATGG AGCCTGGGTT
AAAAGGGCAA TGCTCAGAAC CTTGAAAGGC TATCCGGGAC TAAGGGATCA AAATTGGCGG
TGGGAGAAGG GAAACTCTCC GGAGGCCTCT TGGCAGAATG GACTGAAGGA TAATCTGGGG
AGTATAACAG ATAAGGAAAG GATTGGGGAT TTCCTGGCCA GAACTGAGGG AAGATTATTA
GCCAAGGCTG ACCTGCAGCG GCTGGGGCAG GAATGTCGCT TATCTTATCC GGAGATTTTG
AACCTCTGCC ATGAGCAGGT CGGGAAAGGG GATGCCCAAT GGATTCCGGC CGTGACAAGA
GTAGGAAAAG GCTGGAGATG TGAGCGCTGC GGGGAGACTA AGGTCGAAGA GTGGATAAGC
ATCTATGGGC CGGCTGCCAC TTGCCCGGCT TGTACCGCTT TAGGAGCAGT AAGTTCACTC
CATGAGCTTT ACCGAAGCGG GGGTCCCTCT CAAACTATGT TTTCCTCCTC TACAGAGTCA
GATCATCTGA GCTATTCCTC TTTTTCCGAC TGTGGGAACA TGGCTTGGGA ATTTTCACCC
CGTTGGGAGC TTAGTCCTGC CCAAAAGCTT GCTGCCCAAC AGGTCTTAGA GTTTGTAAAA
GAAGGTGCCG GCGAAAGGGG CGTCATTCAG GGTAGAAACG TTGAGAAGGA AGTGTTGCTC
TGGGCAGCTT GTGGAGCAGG GAAAACCGAG GTCTGTTTTC CGGCCGCAGC ATGGGCCCTT
GAACAAGGGA AAAAGGTATT ATTCGCGGCA CCTCGTCAAG ATGTGGTTCT GGATGTAGCC
CCTCGTCTTC AGCGGGATTT TCCCGGCTTA AAGCTGAGTG TTCTCACCGG AACAAGCCAG
GAGCGTTTTA CGCCAGCTCC CTTTGTTCTG GCAACCACAC ACCAAATTCT GCGTTTTTAC
CAGGCTTTTG ATTTAATCTT CCTTGACGAA ATGGACGCCT TTCCCTATTA TGGCAGTACA
GCCTTGGCTT GGGGAATGGA TCGGGCGTTG AGAACGGGAG GGAAAAGGGC CTATCTGACG
GCTACTCCCT CCCGGGAAAG TTTGGAGAAG GTTAAAGCAG GGAGGATGGA ACTGATCCGC
CTGACCGCAC GCCACCATGG CAAGGCAGTT CCGTTACCGC AGTGGCGCAA GATTGGGGGA
AGTATGGCAC CTGAGCATGG ATGCTCTGGA GAGCAGGGAG AAAAGGTTCT TCAGTGGCTG
AAGGAATTAG CCCTATGGGG TCCGGTGCTC CTCTTTGTGC CCAAGATATC CTGGGTCAAC
CCTTGGGTCG AAATCCTGAA GAAGGAGTTC CCCCAATGGT CAATCTCAGG AAGCTACAGT
GCCGATCCCA ATCGTACTGA AAAAATTGCG GCACTGCGGG AGGGAAGGTT CCGTATTTTT
GTCTGCACTT CGATTCTGGA ACGGGGAGTC ACCCTGCCTA ATGCTCAAAT CATGGTTCTG
GAGGCGGACC ATGGGGTCTT TGACGAGAGA GCCTTGGTCC AAATGGCCGG ACGGGTGGGG
AGGACCCAGG AGAATCCCAC CGGCAATGCC TTTTTCCTAT CCCGCCAAAA GTCAGCTGCC
ATTGCAAAAG CGATTTATTG GATTAAGGAG CAAAATGAGC TGGCCTTCGC TCAGGGTTTA
ATTGACAATT AA
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| Protein sequence | MFYVFVADSG EMTLSPLIDD KHLAEEAEVL RPGLPLSFAQ SLLGEIDEQR QGSGRGGVWP
LWGGYSRERG EDKKRDGAWV KRAMLRTLKG YPGLRDQNWR WEKGNSPEAS WQNGLKDNLG
SITDKERIGD FLARTEGRLL AKADLQRLGQ ECRLSYPEIL NLCHEQVGKG DAQWIPAVTR
VGKGWRCERC GETKVEEWIS IYGPAATCPA CTALGAVSSL HELYRSGGPS QTMFSSSTES
DHLSYSSFSD CGNMAWEFSP RWELSPAQKL AAQQVLEFVK EGAGERGVIQ GRNVEKEVLL
WAACGAGKTE VCFPAAAWAL EQGKKVLFAA PRQDVVLDVA PRLQRDFPGL KLSVLTGTSQ
ERFTPAPFVL ATTHQILRFY QAFDLIFLDE MDAFPYYGST ALAWGMDRAL RTGGKRAYLT
ATPSRESLEK VKAGRMELIR LTARHHGKAV PLPQWRKIGG SMAPEHGCSG EQGEKVLQWL
KELALWGPVL LFVPKISWVN PWVEILKKEF PQWSISGSYS ADPNRTEKIA ALREGRFRIF
VCTSILERGV TLPNAQIMVL EADHGVFDER ALVQMAGRVG RTQENPTGNA FFLSRQKSAA
IAKAIYWIKE QNELAFAQGL IDN
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