| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4656 |
|---|
| Symbol | |
|---|
| ID | 7261684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4964429 |
|---|
| End bp | 4965502 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643564569 |
|---|
| Product | pentapeptide repeat protein |
|---|
| Protein accession | YP_002461089 |
|---|
| Protein GI | 219670654 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACAAG ATTTTTTTGT TGAGTTATTA AAAAGTGGCG CAAAACAATG GAACGAATGG
CGCAAAAATC ATCCTCACCA ATCACCAGTA TTAAGAAATA TTGACTTTAC AAGTGAGTTT
CCTGATGAGA CCGAATTATA TCATTTGCCT CATTTTGATG ATGTTGATTT TTCTCATGTA
GATTTACATA TGTCGTCATT AAGGAATGGC TATTATTATG GATGTTGCTT TGACGGCGCA
AAAATATCAT TTGCAGACCT GGTTGATGCA TATTTCTCAA ATTGTACATT TCGAAATGTA
AACATGCGTG TAAGTAAGGT TGGGTCTGCT ACATTCAATA ATTGTACATT TGAAAATGCC
GACCTTTCCT ATTGTTCTGC GGAGGATACA TCTTTTAAAG GTTCTCAGTT TATCAACGCC
AAATTAGAAC ACGTAAGTTT TATTGCTAAC GATTTTTCCA ATACAAAATT GACAGGGTGT
TTTGTTTACG GTATTTCTTC ATGGGATTTG AATTTAGAAA ATTCAAATCA GGAAGATTTG
ATTATTACGA AAGAAGACCA ACCGATTATA ACTGTTGATA ATATAGAGCT GGCGCAATTT
ATATATCTGA TGATAAATAA TGCAAATTTG AGAAATATCA TTGATACGAT AACATCTAAA
GTGGTATTGA TACTGGGGAA CTTTTCCGAA GTAAGGAAAG CTGTCTTAGA TGAAATAAGA
AGTAAACTAA GACATTATAA TTACATACCT GTAATGTTTG ATTTTGAAAA ACCAGCCTCT
CGAAACTTCA CTGAGACGGT ATATACTCTG GCACACATGT CACGATTCGT TATTGCAGAT
TTAAGCAGCG TAAGAAGCAT CGGACATGAG CTTGCTATCA TTGTTCCCAA ACTCCCATCA
GTAACTTTTT ATCCTATAAT CCTGAAGGGT GAAAAAGAAT ATGGCATGTT TAATGATTTG
CTTATATATC ATTGGGTAAG ACCAATCAAG GAATATCTGC CTAATGGCAT CAAGGAAGTT
TTAGAGGCTA TAATAGATGA TCAGGCTAAG CAAAAGGAGG AATTATTAGA TTGA
|
|---|
| Protein sequence | MTQDFFVELL KSGAKQWNEW RKNHPHQSPV LRNIDFTSEF PDETELYHLP HFDDVDFSHV
DLHMSSLRNG YYYGCCFDGA KISFADLVDA YFSNCTFRNV NMRVSKVGSA TFNNCTFENA
DLSYCSAEDT SFKGSQFINA KLEHVSFIAN DFSNTKLTGC FVYGISSWDL NLENSNQEDL
IITKEDQPII TVDNIELAQF IYLMINNANL RNIIDTITSK VVLILGNFSE VRKAVLDEIR
SKLRHYNYIP VMFDFEKPAS RNFTETVYTL AHMSRFVIAD LSSVRSIGHE LAIIVPKLPS
VTFYPIILKG EKEYGMFNDL LIYHWVRPIK EYLPNGIKEV LEAIIDDQAK QKEELLD
|
|---|
| |