Gene Dhaf_4592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4592 
Symbol 
ID7261621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4889515 
End bp4890621 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content47% 
IMG OID643564509 
Productmethionine-R-sulfoxide reductase 
Protein accessionYP_002461029 
Protein GI219670594 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase
[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase
[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATCA AGGTAAGCCG GATATTCTTA AGTGTTACTA TGTTAATATT TCTATCCATC 
GTCGGTACCG GTTGCAGTGA GGCAGCGGTG CCGGCTGAAT CCGCAAAGCG CTTTCCGTAT
AACCCCAATA TGGGAGTCTC CTATGAAGGA AAAGAACTTC AGGAGATATG GATTGCCGGG
GGCTGCTTTT GGGATGTGGA TGCCTATCTG TCAAGAATTT ACGGTGTGGC CGATGTGACG
GTAGGCTATG CCAACGGGAA CACCGAAAAC CCAACCTATG AGGATGTTTG CTATCGGGAT
TCGGGACACG CTGAAACGGC CTATGTCCGC TATGATCCGG AGCGGGTTGA TCTGGAAACC
ATTCTGGAAT ACTTCTTTAA GATCATCGAT CCAACCTCTT TGAACCGCCA GGGAAATGAT
GTGGGTACTC AGTACCGCAC AGGGATCTAT TATCAAAATG AACTTGACCG TGAGATCATT
CTTAAGGTTA TAACAGAGGA GCAAAACAAG TATAAAAAGC CTATTGTCAC TGAAGTGCTC
CCTCTGGCTC ATTTTTATGA AGCTGAGGAA TATCATCAGG ATTATCTCGT TAAGAATCCT
CATGGTTACT CCCATATTGA TTTTTCGCCC TTAGAAGAGC AAAAACTTGT GAACATTGAT
CCTGGACTTT ATAATAAACC CAGTGATGAT GTACTGCGTA AAACTTTGAC TGATCTGCAA
TATGCCGTGA CCCAAAAGGA TGCCACGGAA CGATCCTTCG CTAATGACTA TTGGGATCAT
CATGAACAGG GTTTATATGT GGATGTGGTT ACGGGGGAAC CCTTGTTTGC TTCAAAGGAC
AAATTTGATT CGGGAACAGG GTGGCCCAGT TTTACCCGGC CCATTGCTCC GGAAGTCATC
ATTGAAAAAG AGGATTCCAC CCTTGGTATG AAGAGAATCG AGGTGCGCAG CCGGGCCGGG
GATTCCCATC TGGGGCATCT CTTTAACGAC GGTCCCCCGG AGGACGGCGG GCTTCGCTAT
TGCATCAATA GTGCCGCCCT GCGCTTTATT CCCCTATCCG AGCTGAAAGA GGAAGGTTAT
GGACAGTATC TCAGCAGGAT TGAATGA
 
Protein sequence
MKIKVSRIFL SVTMLIFLSI VGTGCSEAAV PAESAKRFPY NPNMGVSYEG KELQEIWIAG 
GCFWDVDAYL SRIYGVADVT VGYANGNTEN PTYEDVCYRD SGHAETAYVR YDPERVDLET
ILEYFFKIID PTSLNRQGND VGTQYRTGIY YQNELDREII LKVITEEQNK YKKPIVTEVL
PLAHFYEAEE YHQDYLVKNP HGYSHIDFSP LEEQKLVNID PGLYNKPSDD VLRKTLTDLQ
YAVTQKDATE RSFANDYWDH HEQGLYVDVV TGEPLFASKD KFDSGTGWPS FTRPIAPEVI
IEKEDSTLGM KRIEVRSRAG DSHLGHLFND GPPEDGGLRY CINSAALRFI PLSELKEEGY
GQYLSRIE