| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4548 |
|---|
| Symbol | |
|---|
| ID | 7261577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4840778 |
|---|
| End bp | 4841542 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643564465 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002460985 |
|---|
| Protein GI | 219670550 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.000266703 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGA TCAGTGCCTT AAATATTGAG AAGAACTTTG ATAAGCTGGA AGTTCTCAAA
GGAGTCTCCC TGGAAGTGTT CAAGGGAGAA GTAGTAGCTG TCATCGGCCC TTCCGGCTCA
GGCAAAAGCA CTTTTTTACG CTGCCTGAAC CGGCTGGAAA TGATTGACGG AGGAAGCATC
ACCATCGAAG GGGATGAATT GGTCTCCACC ACGGCAGAAG GAAAAGTGGC TTATGCAGAA
GAATCCCAAG CGCGCATGAT CTGCCGCCGA ATGGGCATGG TCTTTCAGCA GTTTAATCTG
TTTCCTCATC TCACCGTTTT AGAAAATGTT ATTGAAGCCC CCTTAACGGT TAAAGGGGTA
AAAAAAGACG AGATCATCCC TGTAGCCAAG GAATTGCTTG GCAAGGTGGG CCTTCTCGAT
AAGCTGGATT GCTATCCGTC CAGGCTGTCC GGTGGGCAGA AACAACGGGT AGCCATCGCC
CGCGCTTTGG CCATGAATCC TGATATTATG CTTTTTGATG AACCCACTTC AGCCCTTGAT
CCCGAATTGA CCGGTGAAGT GCTGAAGGCT ATGCGGCAGT TAGCTGAAGA GCATATGACT
ATGATTGTGG TGACCCATGA AATGAGCTTT GCCCGTGAAG TAGCCAATCG CGTTATCTTC
ATGGACAAGG GAGAGATCGT CGAACAAGGG GACCCGGAAG CCGTGTTTGG AGATCCTAAG
CAGCAAAGGA CTCAGGCTTT TCTCAATCAC ATGAGCGCCA AGTAG
|
|---|
| Protein sequence | MKMISALNIE KNFDKLEVLK GVSLEVFKGE VVAVIGPSGS GKSTFLRCLN RLEMIDGGSI
TIEGDELVST TAEGKVAYAE ESQARMICRR MGMVFQQFNL FPHLTVLENV IEAPLTVKGV
KKDEIIPVAK ELLGKVGLLD KLDCYPSRLS GGQKQRVAIA RALAMNPDIM LFDEPTSALD
PELTGEVLKA MRQLAEEHMT MIVVTHEMSF AREVANRVIF MDKGEIVEQG DPEAVFGDPK
QQRTQAFLNH MSAK
|
|---|
| |