Gene Dhaf_4542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4542 
Symbol 
ID7261571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4833972 
End bp4834577 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content44% 
IMG OID643564459 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002460979 
Protein GI219670544 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.204937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATAGCA ATCTTATACA CAGAAAAGAG AGCCTGGTCA TTACAGCTAT CTCCCTGATC 
AATGAAAAGG GCTTGCAAGG CCTTTCCACA AGAGAAGTGG CCAAACGGGA AGGGGTTTCC 
GAAGCCACTA TCTTCAAGCA TTTTAAATCG AAAAACGAAC TCGTATCAGC CGTTCTTGAG 
CACTCTTCCC AATATGATCA TGCTTTGTTG GAAGCAGCCC TGACGAAGGA CTTAACTCCC 
AAAGAGAAGG TTCTTCATCT TATCGACAGC TATATAACCT ACTGTGAGAA CTATCCGGAA 
ATTACGGCGA TCCTTCTGGC CTACAATGGC TTGTTGTACG AAGAAGAGCT TAAGGACAAG 
GTTATGGAGA TTATTTGCCG ACGGTCAAAA GACATCCAAT CTTTAATTTA TAGCTCCATC 
GCAATGGGTG AACTGAATCC ATCCGTTCAT AGTGAAAGTT TAACCAATAT CATTCTGGGG 
ATGATCCATG AGATCATTCT CAAGTGGCGA ATGGCGGAGT TCAGCTTTTC CTTGCGGGAG 
CAGACTCTTG CTTCGGCAAC CATGCTTTTA GAGGCTTTCA CCATGAGACA CGAAGCCAAA 
CTATAG
 
Protein sequence
MDSNLIHRKE SLVITAISLI NEKGLQGLST REVAKREGVS EATIFKHFKS KNELVSAVLE 
HSSQYDHALL EAALTKDLTP KEKVLHLIDS YITYCENYPE ITAILLAYNG LLYEEELKDK 
VMEIICRRSK DIQSLIYSSI AMGELNPSVH SESLTNIILG MIHEIILKWR MAEFSFSLRE 
QTLASATMLL EAFTMRHEAK L