| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4489 |
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| Symbol | |
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| ID | 7261518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 4770112 |
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| End bp | 4772178 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643564406 |
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| Product | glycoside hydrolase family 18 |
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| Protein accession | YP_002460926 |
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| Protein GI | 219670491 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG2247] Putative cell wall-binding domain
[COG3858] Predicted glycosyl hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00179307 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA GCATCAAAAC AGCCGTTGTG ACTCTGACGG CATTCACCCT TTTATTCACA
AGTCCCATGT TTACTCCCAT AATACCTGAG GAAGTTAAAG CGGAAACCTC CATGACCCAG
CCGTTGCGTC TTGCGGGGAC TTCCCGTTAT GATACAGCTA TTCAAGTTTC CCAATCAGGC
TGGAATTATG CCGATGCGGT GGTTCTGGCC CGGGGGGATG ACTTTCCCGA CGCTCTGGCC
GGTGTGGTAT TGGCAAAAAG TTCCCTGGTC AATGGCCCTC TTCTCCTGAC CGAGACCGCT
CAGTTGAGCG AAGGCGTGCT GGAAGAAATC CAGCGTCTGG GTGCCACTAA GGTCACTATC
CTGGGCAGCC CGGGCGCCGT ATCTGAGAAG GTCGAGAATA CCTTGACCGA TCAAGGCTTA
ACCGTGGAAC GCCTTGAGGG GGCCAATCGT TATGGGACGG CGGGTGAGAT CGCTAAAGCA
GCCGTTCCTC AGTCCGAAAA GGTTTTCCTG GCTTCCGGCA GTGATTTTCC CGATGCCTTA
AGCATTTCCT CTTACGCTGC CGCTCAGGGA ATCCCCCTTC TTTTAACAGA AAAGAAATCT
GTTCCTGAGG TGACTCTGGA AACTCTGCAA GCCCTGGGCG TCTCCGAAGT GACTTTAATC
GGCGGGGAGG GAGTCATCCT TCCTGAAGTG CAGGCGCAGC TGGAGGACCT GGATTATACC
GTGGATCGTC TCTCCGGCGC GGACCGCTAC GGAACCAATC TGGAAATACT CAACAGCTTA
AGCTTCAATA CAGAGGCTGT CTATATCGCT ACAGGGGCGA AATTCCCCGA TGCCTTGGCA
GGAGCCGCCC TGGCAGCACA GAACAATCAC CCCATCGTCT TAGCCCCGCC CAAGGCCTTC
AGCGAAGAGG GCATGAGCTA CCTGGGCAGC CGCCGTGACG AGGGGGCCGC CTTCACTCTG
CTGGGTGGTT GGGGCGTGAT CAGCTATGGC ATGGAAAGCA TTATCCGCAC AGGGAATGTG
AATCCGAAGA TTTCCCTCCA ATACTGGGAT GGTTATGCCA GCTATGAGAC CTATCTTCGT
CAACTTTCCT TGATTCCCGG CAAGGCTACC GATTATGTGG ATTATGTGTC CCCCAACTGG
CGTGGTTCCA TCGGTACGGA TGGAAGCTTG AAGCTGGTAT GGGATGAGGG TTCCAGCAAT
TATAAGCAGC TGACCAATAT GGCTCACGGG CTGGGCATGA AAGTTCTGCC TCTGATCAAT
GGCAGCGGGG CAACCTTGAA TACTCTCTTG AAAAGCCCGG CCGCCCGGGA AAAGCTGATC
GGCGAGATCG TGGTTCTGCT TAAGAATACC AATGCGGACG GAGTGGTCAT CGATTTTGAG
ACTCCTTTGG ATTACGGGGA TGTCAAGGAT CCCTATGATG GAGTAAGAAA CGATTTGACC
GCCTTTATGG AATCCCTCCA CTCTGAGTTA CAGTCTATGA ATAAGCTGGT GGTCATGGCG
GTCATGCCCC GCATGTCTTC CTCTCAGTAC TGGCTGGATG CCTATGATTA TGAAGCTCTT
TCTCATGCTG TGGATTATCT CCATGTCATG ACCTATGATC ATCATTATCG GACTTCCGCT
CCCGGACCCA TCGCCCCTTA TCCTTGGATT AAGCAGGTTC TGACCTATAT CCAAGGTCAA
GGGGTAGACA TGAGCAAGGT TCTGATGGGG ATTCCTTATT ACGGACGGGA TTGGGTGGTT
GACGGTAAAG ATGCCAATGG CAATCCCACC TACAATTCTA CAGCCTTCGG CTATTCCAAG
GCTTTAGAGC TCGCCGACTC CTATGGCGCA ACTATCACCT ACTCCAAATA CAATGATGCG
GATCCTGTAG GGACACCGAC CTTTAAGTAT ACCGATGAGA AGGGTGTGGA GCACACCGTA
TTCTTCGATG ATTATACCAG CTGGAATGCC AAGCTCTCCA TCATCAATGA ATTCGGACTG
GCTGGAGTAG GCCCCTGGGC GATGGGCTGG GTGGATGAGA ATACGGCTGA AGGCCTGTTT
CCACTGCTCA ATCAGCATCT GCGCTAG
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| Protein sequence | MKKSIKTAVV TLTAFTLLFT SPMFTPIIPE EVKAETSMTQ PLRLAGTSRY DTAIQVSQSG
WNYADAVVLA RGDDFPDALA GVVLAKSSLV NGPLLLTETA QLSEGVLEEI QRLGATKVTI
LGSPGAVSEK VENTLTDQGL TVERLEGANR YGTAGEIAKA AVPQSEKVFL ASGSDFPDAL
SISSYAAAQG IPLLLTEKKS VPEVTLETLQ ALGVSEVTLI GGEGVILPEV QAQLEDLDYT
VDRLSGADRY GTNLEILNSL SFNTEAVYIA TGAKFPDALA GAALAAQNNH PIVLAPPKAF
SEEGMSYLGS RRDEGAAFTL LGGWGVISYG MESIIRTGNV NPKISLQYWD GYASYETYLR
QLSLIPGKAT DYVDYVSPNW RGSIGTDGSL KLVWDEGSSN YKQLTNMAHG LGMKVLPLIN
GSGATLNTLL KSPAAREKLI GEIVVLLKNT NADGVVIDFE TPLDYGDVKD PYDGVRNDLT
AFMESLHSEL QSMNKLVVMA VMPRMSSSQY WLDAYDYEAL SHAVDYLHVM TYDHHYRTSA
PGPIAPYPWI KQVLTYIQGQ GVDMSKVLMG IPYYGRDWVV DGKDANGNPT YNSTAFGYSK
ALELADSYGA TITYSKYNDA DPVGTPTFKY TDEKGVEHTV FFDDYTSWNA KLSIINEFGL
AGVGPWAMGW VDENTAEGLF PLLNQHLR
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