Gene Dhaf_4413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4413 
Symbol 
ID7261442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4683510 
End bp4684235 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content45% 
IMG OID643564334 
ProductGntR domain protein 
Protein accessionYP_002460854 
Protein GI219670419 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones152 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTGAAC CAGTTAAAAC TCATGGTAAT TTATCTGAGG AAATTGTGAA ACAAGTTGTC 
CAGAGTATCA GTAACGGTGA ACTTAAGCCA GGGGATAAGC TGCCTGCTGA ACGGGAAATG
TGCAATGTGT TTTCAGTAAG CAGAACAGTG GTCCGTGATG CCTTGAAGAC TTTGGCAGGG
CTGGGCATGG TTACGATTCG CCATGGCCTG GGGGCTTATG TCAATGAGGT GGATGAACAA
GTCGAGGATG TATCACGGTT AGCGGCACTG CTCCAGATAA CCCAGGGTAC TTTTGATGAA
ATATTTCAAG TTCGAGAAAT ATTAGAAGGG TATGCGGCAT TATGGTGTGC TCAAAATGCC
GATGATAAGG ACATCGAAGA GCTTGGAAAA ATCGTCAAGA GAGGTAAAGA GCTGGGCTCT
GCCAGTGATG GTAAGCTTGC TTTACTTGAT GCAGAATTCC ATCTTAAGAT TGCTGAGGCA
TCGGGCAATA AGGTCCTCAA GCGTCTGATG ATTAACATTC TGGATTTAAC CGGAGAAATC
AGAGACAGCA GCTTTAAGAT TCCCGGACGT CAGTATTTGT CCGTTTTAGA GCATGAAGCG
ATTTATGAGG CAATTAAACA GCGTGATCCG GAGTTGGCGT TTCAGAAAAT GATCAAACAT
ATTGAAGCTG TGGAAGATGA TCTGCATTCG AACGCCCATG TGAGGGAGAA TGCCTGGGAT
GAATAA
 
Protein sequence
MFEPVKTHGN LSEEIVKQVV QSISNGELKP GDKLPAEREM CNVFSVSRTV VRDALKTLAG 
LGMVTIRHGL GAYVNEVDEQ VEDVSRLAAL LQITQGTFDE IFQVREILEG YAALWCAQNA
DDKDIEELGK IVKRGKELGS ASDGKLALLD AEFHLKIAEA SGNKVLKRLM INILDLTGEI
RDSSFKIPGR QYLSVLEHEA IYEAIKQRDP ELAFQKMIKH IEAVEDDLHS NAHVRENAWD
E