Gene Dhaf_4316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4316 
Symbol 
ID7261341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4576259 
End bp4577257 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content48% 
IMG OID643564233 
ProductDNA polymerase III, delta subunit 
Protein accessionYP_002460757 
Protein GI219670322 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00186458 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGGAAA TAGATCAAGT TCGGCAAGGA ATTGTCAAGA ATCAAATTCC TTCCGTCAAT 
CTTTGGTATG GTGAGGAGCG GTTTTTTATT CAAGAAGCTC TTCAATTATT AAAGAATAGT
TATCTTGCCC AAGACCCATC GGGCAGTGGC ATAGAAATTC TATCTGGAAA AAGTACCGGA
CCGGAGCAGA TTGTGGAAAT CGCCAATACG GTCTCTTTTT TTGGCGGCAA ACTGATTATC
GTTGAAGATA TCCCCTATTT TCAAGATGGT CAAGGGGATG CTTTGGAACC TTTTTTCGCT
TATTTTGAAA ATCCCAATCC AGGGACTTGT CTTGTTTTCC TTGCCCAAAG TGTGAATCGT
GGGCGTAAGT TCTTTAAAGC TATCGAGAAA AAGGGGTCAA TCCTGGAATT CGTCAGCCCC
AAGCGACAGC AGGAATGGAG TGCTTGGCTG GATCGGGAAT TGGCTGCCCG GGGAAAAACC
ATGAAGCCCC AAGTCAAGGC TCTTTTTCTG GAGTGGGGAG GACATCAGGT AGGGGCCTTA
AGTCAGGAGT TGGATAAGCT TGCTTTATTT GTGGAGGGCA AAGAAATCCG GACAGAAGAT
GTCAGGAGTT TGGTTCCCCA GGCGGTGGAG GCCACTGTCT TTGAACTCTT GGATGCTGTA
GCGGCCCGCT CCTCGAAGGA AGCGGTGCAA AAGCTTCAAC AAGTGCTGCG CCAGGAACAT
TCCTTAAAAG TCCTGACTCT ATTATCCCGT CAGGTTCGCC TGCTCCTCGG GGCACGAGCG
ATGCGGCAAC AGGGAAGAGG TGCGGAAGAA GCTCCCCGAC TCCTGGGTAT TAAGCCTTAT
GAAGCCCAAA AAATATGGCA GAAAGCAGCC CAGTTGACCT GGGAGCAATT ATCCTGGGCC
CTAAGAGAGT GTCTGGAAAC GGATGTGGCC ATCAAGACCG GAAAAGGGGA GCCTGAGTTT
CTGCTGGAGC TGATGGTGGT TAAATTTTGT GAGATGTAA
 
Protein sequence
MWEIDQVRQG IVKNQIPSVN LWYGEERFFI QEALQLLKNS YLAQDPSGSG IEILSGKSTG 
PEQIVEIANT VSFFGGKLII VEDIPYFQDG QGDALEPFFA YFENPNPGTC LVFLAQSVNR
GRKFFKAIEK KGSILEFVSP KRQQEWSAWL DRELAARGKT MKPQVKALFL EWGGHQVGAL
SQELDKLALF VEGKEIRTED VRSLVPQAVE ATVFELLDAV AARSSKEAVQ KLQQVLRQEH
SLKVLTLLSR QVRLLLGARA MRQQGRGAEE APRLLGIKPY EAQKIWQKAA QLTWEQLSWA
LRECLETDVA IKTGKGEPEF LLELMVVKFC EM