| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4312 |
|---|
| Symbol | |
|---|
| ID | 7261337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4572589 |
|---|
| End bp | 4574154 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643564229 |
|---|
| Product | integral membrane protein MviN |
|---|
| Protein accession | YP_002460753 |
|---|
| Protein GI | 219670318 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
|---|
| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000000871225 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGTA CGCGGACGGT AGCTATGGCG GCCGGACTCT TAATGCTTAC ACAGCTTGCA
TCAAGGATTC TGGGCTTCTT AAGAGAATCC TTGATGGCGA ATTTCTATGG AAAAACGGGA
GTGACCGATG CTTACCAGAC GGCATTTATT CTTCCGGATT TAATTTATTG GCTTTTAGTA
GGCGGAGTTT TAAGCTCTGC CTTTATTCCT GTATTCTCCG AATATATCCA TAAAGGAAAG
GAAGAGGAAG GATGGCGGGT GGCCAGTTCT TTCATTAATT TGATCCTTTT GCTTTTAAGC
GCTTTGGTTA TCTTGGCCCT GATCTTTACT CCCTATTTTA TTCGTTTGCA GGTTCCCGGA
TTTACAGCGG AAAACCAAGC TCTGACCGTC CTGCTCACCC GAATTATCTT GATTCAACCC
CTGCTCCTGG CTTTAAGCGG AATTACCATG GGAATCTTAA ACTCCTATAA GATCTTTTGG
CCCAGTGCCT TGGGTACGGT TCTCTATAAT GCCAGTGTCA TTGTCTTCGG TGTGATTCTG
GCCCGACCTG ATGAGCCGGA ATCCATCTCC GGTTTTGCCA TCGGGGTCGT GGTGGGAGCC
CTGCTTAACT TTGTGGTGCA GATACCTGCT CTGCGCCGTC AAGGACTTCG TTATTATCCC
ATCATTGATT GGCGGCATCC CGGAGTCCGC AAAATAGCGG TTCTGGCCGT TCCGATTATT
CTCAGCTATT CCTTGAACCA AATCCAAGTA GTAGTGAACT CGAACTTAGG ATCTCACCTT
ATCGAAGGCA GCTTGACGGC GGTGTGGTAT TCTTACCGTT TATACCAGCT GCCGGTGGGC
ATTTTTGCTC TGGCTATTGC CGTCGCTGTG TTTCCGACCT TAAACGAACA TGCTGCCTTG
AATAAGTGGA AGGATTTTGT TCTGACTTCA TCCCTTGCTG TGCGTATGGT GATTTTTATT
ACCTTGCCTA TTTCTATAGG AATGATTGTT CTGCGCTATC CTTTGATCCG GGTGCTCTTT
GAGCATGGGG CATTTACCCC CACTGACACC TTCGCTACGG CTATTCCGCT TTTGTATTTT
GCCGTGGGGA TCTCGGCCCA ATCTGTGATT CAAATTCTGC CGCGGATGTT TTATGCTCTT
CAGGATACCT GGACTCCGGT GGTCATCGGC ATTATCTCCA TGCTGGCCAA TGTGGCGTTC
ATGTTTCTCC TGGTCAGACC CTTGCAGACT GGGGGATTAG CTTTTGCCAC GTCCTTAGCT
GCTGTACTTA ATGCGATTCT GCTTCTTTAC CTCCTGCGCA AGCGCTTAAA ATCCATTGAC
GGCCGGAGAA TGTTTGCAAC TACTCTTAAG ACTTTAGCAG CTTCCGGTGT GATGGGACTG
GCAGTCTGGT TTGGGGGGCA GTGGCTGACC TCTCTTGTCG GAGTAGGGAA ATTGGCTTCC
ATCTTTGTCC TGCTGGCGGG TACGTTGCTG GGCGCTCTCA TTTTTGCCGC CGCAACCAAG
GCCATGGGTA TGGAAGAGTT TGAACAGACC CTTGGTCTAT TTCAGAAACG TTTCAGGAGA
GGGTAA
|
|---|
| Protein sequence | MSGTRTVAMA AGLLMLTQLA SRILGFLRES LMANFYGKTG VTDAYQTAFI LPDLIYWLLV
GGVLSSAFIP VFSEYIHKGK EEEGWRVASS FINLILLLLS ALVILALIFT PYFIRLQVPG
FTAENQALTV LLTRIILIQP LLLALSGITM GILNSYKIFW PSALGTVLYN ASVIVFGVIL
ARPDEPESIS GFAIGVVVGA LLNFVVQIPA LRRQGLRYYP IIDWRHPGVR KIAVLAVPII
LSYSLNQIQV VVNSNLGSHL IEGSLTAVWY SYRLYQLPVG IFALAIAVAV FPTLNEHAAL
NKWKDFVLTS SLAVRMVIFI TLPISIGMIV LRYPLIRVLF EHGAFTPTDT FATAIPLLYF
AVGISAQSVI QILPRMFYAL QDTWTPVVIG IISMLANVAF MFLLVRPLQT GGLAFATSLA
AVLNAILLLY LLRKRLKSID GRRMFATTLK TLAASGVMGL AVWFGGQWLT SLVGVGKLAS
IFVLLAGTLL GALIFAAATK AMGMEEFEQT LGLFQKRFRR G
|
|---|
| |