| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4303 |
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| Symbol | |
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| ID | 7261328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4554054 |
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| End bp | 4560422 |
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| Gene Length | 6369 bp |
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| Protein Length | 2122 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643564220 |
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| Product | LPXTG-motif cell wall anchor domain protein |
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| Protein accession | YP_002460744 |
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| Protein GI | 219670309 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4932] Predicted outer membrane protein |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTTTTC GCAAAAGCAA AAGTAAAGTT AGGATAGCTG TTCTGGTTAT TCTGGCCATG
CTTATGCAGG CAGTGGGACC GATAGCACCG GCCTTCGCCG CAACCGGCGG GGAAAGTTTT
CGCATAATGG ACGAAAACAT TGCTGAGGGC ACAGCCTATC TGGACTGGGA ACTTACTCTT
GATCCGGACG ATCCGGTAAC AGTGTATTCC TATACGGGAG GATTTACTCT GAACGAAGCA
GTAGCCTCCG AACTCAGGGC GGCGGACGGC ACAGTGCTGG GCAGCTATCA TATTTCCACA
GCAGGAGCAT TGACCGTTAC CATCGACCAG GAGCTTTACG CCGGCCTGGA GCAGAAGGAA
GTGGACCCGG ACCCGGCAGA ATCAGAGGGA CCGGTAATGG TGGAGGAATC CGGGCCGGAG
ATGGCTGAGG GAGGCACCGC TCCGGAGAGC GCCCCGAATC CTGAAGCCCC GGCAGAATCC
CCAGAAGGAG AAGCTCCCGG AGCACCGGCA ACACCAGCTG AACCCGCAGC ATCGGTGGAA
GTGACGACAG AGCGGGAAGA ATCAGCGGAG GCAGCGGCAG CGCCTGCTGA ACCTGAAACA
GTGGAACCCG CGGCACCCGA GGAGATTCAA GTCCCCGTAG AATATGCGAT CCAAACCTTC
ACAGGCACCA TCATTGTTCC CGGAGCGGTG AAGAACCCCG GCCTTGTGGG TAAGATCAGG
GGGCTGATGG GAGTACGAGG CAGCGGTATG GAAATTAACA AATCCGTACT TACCAATCTC
AAGGAGACGA TCACACAGGA TGGGAAATCT ATCGCCGAAA GCGGCACCAT AATGAGCACC
AGGCCGATCA AGGTAGAGAT TTCATTTGGT GTGCCGGTTG AAGGCGATGA TCCAACACCC
GTAAATCCAG TTAAAAAGGG TGATTGGATT ATATTTGAAC TGGGCGATGC ATTTGAGTTG
ATTTCGGGAT CTTCTATTGA ATTAAAAGCG GAAAGTGGGA CGCTAGTAGG CTACGTATCT
TTTGAAGCGG ACTCCGTGAC AAAGATGGTG ACTGCCAAGG TCGATTTTGA CGGAGAAGAA
GAAGTTTTTA ATGGGGATGT CCATTCTGTA ACTTGTAAGT TCCATGCCGA GTTTCAATAT
GACGCCAGTA GCAGCAGCGG CGGTGCGGGG GATCATACAG TAACAATACT GGGAAAGCCA
TATACGGTGA ACGTCCCTGC TGTGCCCATT GAGTATAATG TTACAAAAAC GGGTACTGCG
GACCTGGCGG ACCAAAGCAT TACATGGACG GCCAATATCA GCGCGACACA GGGTGGCACA
GATGTTGACT TAGCTGGGTA TCAGTTCTTT GATGATTTGA CCAGTGTCGG CGACTATATG
GAAGGCACTT TTAAAGTGGG CTCAGAGGGT AAGGCTCCTA CTTTAGAGGA TAAAAAGCTG
AGTTACATTT TCCCTACCGA AGGTTCAGCC AGTCCCCGAA TCATCGAGTT TAAAACAAAA
ATACCCGACG GTAAGTATCA GGCTAACAGC AAGCAAACAG TAGTCAACAA AGCCGAACTT
CGCGACAAAG ATGAGAAGAT GATGGGCAGC GGTCAGTCGT CTGTCGAATT TACACCAAAG
TGGATTGAGA AAAAAGGCGT GTCAAGCGAC GCTGGAAGCA GTGGCACTTA CGACCCGAAA
GATCGTACAA TAACTTGGAC GATTACTGCC AACCACATGG GGGCAGATTT AAAGGGTGTT
GTCATAACCG ATAAATTGCA GGGCGATTTA GAGCTCCAAT CTGCTAAATG GCAGACTTGG
AATGGCTCAG AATGGGTTGG AGAGAAAATC ATTACACCCG ATGGAGCCGG CGAATATAGC
ATTGGCGACA TCAACTCTGA GATTCTGCTT ACTATCGTAA CTGAGGTTCC CAATGATGAT
TATACGACTG GCGAAAAAAC ATACACTAAC TCTGCTAGTA TCAGATGGAC CGGCGTAACT
GGTTCCGGCC CCGGTTCGGG CAATGTTGGT GTGACGATTG GGTACAACGC CATGTCAAAA
TATGGTGTGG TGGATGCTGC GAACCAGAAA ATTCGCTGGA CCGTCACTGT AGATACAAAA
AAGCAAGAGA TTCCCGATAT GAAAGTATAT GATCTTCTTG TTTATGGGAA AAGTATTGAC
CTCTCAAATG TTAGCGGGAT TCCCGAAGGC ATTGCTCATG CTAATCTGAC ACCGCGCTTT
GGCCAGAAAT ATGCAGACAA TTTTTCCGGA TCACCGTTTA CGATGAACGT GATTCCTATT
ACGCAGGGCG ACGTACAGGT TGCCGATTTG CTGGAAATCA CAGGCTTGTC TACGACCAGC
GTGAACACCT TCAGCTTTAA CAGCCAGGTT GTAGATCCGG ATATATTCGC CGGGAATAAG
ACGCCTACCG TGCAGAACAC AGCGACACTA TTCAGCGGCA CCACAAAGGT GAACGCTGCT
ACCGGAAGCG TAAATTACAA GAACAATATG CTTCTCAAGG GCATGCTAAA GCGGGCCGCG
ATATCCAATC CGGCGACCGG CGTAAATGCC CATAATACCA CGACAGCGAC AGAGAGCTTT
GACTATCAGG ATAAGTCGGC GATTTTCCGC TTAAGCGTCA ACGCCGATGG CATCGATTTG
ACCAATACGA CAAACGCGGC AGGGGAACCG CTGGGAAAGG CAACCCTTAC CGACACCCTG
CCCGAGGGAT GGGAGTTTGT TGATATAGTC GAAGGTTCAA AGTACCTGAT TTTTGAAGGC
ATCAAGAAAT CCGACAAACT CGTTGACGCT GAAGATATCA CGCCGGATAC GGTCACGGGC
CTTAATGCTA GCTTTAACGG GCGCACAGCA ACCTTTGAAT TTACCTCGCT GGCTCAACCA
TATGTAATAC TGGTCAAGTC AAAACCCACC AGTGCAACTG TAGCGGAGTA TTTTTCTAAG
AATGATACAG AAACGATAAC GAATAGCGTA GCTTTAAAAA CCGAGAGATG GACTAGCGGC
GTGACGAGCA CCCAAAATAT AACCATCACC AGCGAGATCC TGGGGAAAGC CTGGGAGCTG
ATAAAAGCAG GTGAAGTGCG CTGGACAGTG GATTACAAAC CCTACGACCT TGAGCAACCC
GGCGAGAGAC TGGAAGATAA ATTGCCGCTT GGTATTGATC TGCGTATGGA CTCCAGCGGG
AAACTGGTGC TTGAGGGAAA TATTACGGCC AACGAGATGA CTCTCCAGGC AGACGGAAGG
TATACACTTG GAGACCCCGT TGAGCTTAGG TTAGGGACGA ATGTGAGCTA CGATAATGGG
AATCGGGTGC TGAGCTTTAT CATCCCCAAC AAAGCAAAGG CGTACAGATT CAGCTATATC
ACCGATGTCA CAGGCGAGCC GGGAAGCGTT ACGAACAAAG TGTCCTTGCT TGGTGAAAAC
AGTGTGGGGC AAGAAAATAC AGGCAAGAGT TACTCTATTA CGGCCCAAGA CGGCAGTGCC
AGCTTGCTAA GGAATGGTTC GATAAGTATA ACGAAGACCA AGGAAGGGAG TGTCCCTTTT
CCGGGTGTTG AATTCACGCT ATACGCTAAG GATGGCACTA CGGTCATCAA AAAAGGCGTC
ACCGGCAGCG ACGGCACCCT TAAGCTTAAG GTCATACCCG ACGGAGAATA TATTCTCCGA
GAAACAAAGG TGCCTGATAG TTCTGGATAT ACCCTGGAAA ATGTAGATCA TTCCCTGATG
TTTACGACCA GCGGCGGGGG AATTGTCTCT TCTATTGATG GAAAAACAGG AACGCAGACC
GCCGTAATCA CCATCCAAAA CTTTCAGACA GGTACGGTTG GGAACCTGAA GATCAACAAA
GTTGTGGCTG GCAATGATGC CGATACCACA AAGGCATTTA ATTTTACGCT GACGCTGGAT
GGCGCAGCCG GCACCTATGC TTATATAGGG CATGGAGTAC CTGGTGGAAC CATTAAAACT
GGAGATGATT TTTCCCTCGC TCATGGACAG AGCATTACTA TCGTGGGTTT GCCCAAGGAG
GCAGCTTATA CAGTGACTGA GGCAGACTAC TCCGGCGACG GTTACTCTAC GATCAGCACA
AATGAGACCG GCAACATTGT GGCAGATACT ACGCAGACAG CTTCTTTTAC TAACAGCCGG
CTTGAGATCA CTGGAACCAA AGTCTGGCAG GGTGGGCCGG CAGTCAAACC GGAGATTCAA
TTACAGCTAT ATAGAAATAA CCTACCTTTA GGATCGCCTG TCACTTTGAA TGGCTCAGAG
ACGCCCTCGT GGATCCATAC CTGGACCCAC TTGGATAAGA CGGATTCTGA TGGTAATGAT
TACCGATATC GCATCGACGA AGTTAAGACT CCGCCCAACT ACGGCAAATC CATCTCCTCG
GACGGACTCA CTATTACCAA CACCTATGGC TCACCCAAGA CAGCCATTAC CGGCAGCAAA
ATCTGGGAGG GCGGGCCAAG TATCAAGCCC TCGATCCAGC TCCAGCTCTA TCGCAACGGA
GTAAAGCAAG GGGAGCCGGT AGAACTGGTC AATGGTCAGC TCAGCCACAC CTGGAACGGT
CTGGATACAA CGGATAATAC AGGCAGAGCG TATACCTATA CCGTAGATGA AGTGGAGGTC
CCGCCGGTTT ATGCCAAGAC AGTTTCCCCG GATGGCCTCA CTATCACCAA CACCTTTATC
GGCAAGGTGG AGTATGCCAT CGATCTCAAG GCTGATCCTT CCACCATCGT TGGTGACGGC
AAATCCGAGA CGGTGCTAAC CACTCGGGTT ACCGATGACA AGGGCAACCC GGTAGCCGGT
GTGGAAGTAG TGTTTGAAGC GCCTTTGGGC ACCTTTCTGG GCGACCCCCG GAACCCTCAG
GTGGGCAAGC AAACAGGGGT GACCGACGCT AATGGGGAAG CTCAAATCCT TTACCGCTCT
GAGAAAATCG AAGGAATTGA CCCCCAGAAG GTTCCGGTGA TAGCAACCGT GGCGGATCCG
GAAAAAGGGC TTTACGCTAC GGACACCATC TATATCATCT TTGAACCGTC GGCTATTACC
GGGGTTGTCA CAGACAACCA GACAGGTAAG CCCATTGCGG GAGCCAAAGT CGTGGTCACG
AAAGACTTCG ACGGCGACGG CATCATAGAC TTCAGAGGGG AGTGTATCAC CGGCCCCGAC
GGCAAATATC GGGTCCCTAT TCCGAAAGGG GATACCGTAT ATGACGTTGA AATCACCAAA
TCTATCATCA TCAACGGCGA ACCGGTCGAT GTCAGCTTTA AGCAAAAAGC GGAAGCCGGC
GAAGTGAACG CCGATCAGGG TGACGAAGAA TTCCCGGCCC AGGAAACCTT TACAGGAGTC
ATCATCACCA GGGATAAGGA CGGCAGGGAG CGGATCGCCG GCCGGGGCAC CGATGAAAAA
ATCGTGCTCA AGCAAGTAAC CGCGGAAGGC GTTGGCGGCA AAGAAGCTGA GGTAGATTCG
AAAACCGGTG TCTTCACCAT CGAGGAATTG TCCAAAGGTC AAACCTATGA ATTTGTGATG
ACCATGGAAG TAGAGGGCCA AGAGCTGATC ATGGGTAAAA TCGTCGTTCA GCTTAACACT
GACGGACAAA TCAGCATTCA CGAGGAGCTG ATCGACCCCT ACGGTACAAT TACGGACAGT
GAGACCGGTA AGATATTGGG AGATGTGTAT GTAGAATTAT TTTATGCAGA TACTCCCAGA
AATAAAGCTG AGGGAAGAAC ACCTCATACC AAGGTAATTC TGCCTATACT GCCGGGCTTT
GCGCCCAACG ACAATGAAAA TCCTCAGCGG AGTGCCTCCA CAACCGTATT TAATGAGCAT
CCAAGTGTAA AAGATCATGG AAACTACGCC TGGATGGTCT TCTCAGAAGC AGATTATTAT
ATCAAAGGCA CCAAGACCGG TTATAACACT TATACCAGCC CCACGATTTC TGTTGACTTT
GATGTAGTCA AACATGATTT CGTCATGCAG CCTCTTGATT CTGGTGGAGA CGGCGACGGT
GGCAGCAGTG GCGGTGGAAG TGGCGGCGGA GACATTACAC CAACACCGAC CGAGGATAAC
ACAAAACCGG CAGTGCCTGG GCAAACACCA GCTACCCCGG GAACAGAAAC GCCGGAAATT
CCTGAAAAGC CGATAGATAC CCAAAAACCG GTAGAACCAC AACATCCTGC AAAAACACCC
ACCGACCCGT CCGATAGACA GGCGACAGGG ACACCGGAAG CAGGGGGTAA TCAAGGTACA
GGAGAAACCC CGGCGGACGG CAAAGGGACC TTGCCGAAGA CCGGTGAAAA CGGCAATTCA
GGATATTACA CTTTGGGAAT GCTGTTCATC GCTCTGGGAC TTTACTTAGG GAGAAGAAGA
ACGGCATAG
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| Protein sequence | MFFRKSKSKV RIAVLVILAM LMQAVGPIAP AFAATGGESF RIMDENIAEG TAYLDWELTL
DPDDPVTVYS YTGGFTLNEA VASELRAADG TVLGSYHIST AGALTVTIDQ ELYAGLEQKE
VDPDPAESEG PVMVEESGPE MAEGGTAPES APNPEAPAES PEGEAPGAPA TPAEPAASVE
VTTEREESAE AAAAPAEPET VEPAAPEEIQ VPVEYAIQTF TGTIIVPGAV KNPGLVGKIR
GLMGVRGSGM EINKSVLTNL KETITQDGKS IAESGTIMST RPIKVEISFG VPVEGDDPTP
VNPVKKGDWI IFELGDAFEL ISGSSIELKA ESGTLVGYVS FEADSVTKMV TAKVDFDGEE
EVFNGDVHSV TCKFHAEFQY DASSSSGGAG DHTVTILGKP YTVNVPAVPI EYNVTKTGTA
DLADQSITWT ANISATQGGT DVDLAGYQFF DDLTSVGDYM EGTFKVGSEG KAPTLEDKKL
SYIFPTEGSA SPRIIEFKTK IPDGKYQANS KQTVVNKAEL RDKDEKMMGS GQSSVEFTPK
WIEKKGVSSD AGSSGTYDPK DRTITWTITA NHMGADLKGV VITDKLQGDL ELQSAKWQTW
NGSEWVGEKI ITPDGAGEYS IGDINSEILL TIVTEVPNDD YTTGEKTYTN SASIRWTGVT
GSGPGSGNVG VTIGYNAMSK YGVVDAANQK IRWTVTVDTK KQEIPDMKVY DLLVYGKSID
LSNVSGIPEG IAHANLTPRF GQKYADNFSG SPFTMNVIPI TQGDVQVADL LEITGLSTTS
VNTFSFNSQV VDPDIFAGNK TPTVQNTATL FSGTTKVNAA TGSVNYKNNM LLKGMLKRAA
ISNPATGVNA HNTTTATESF DYQDKSAIFR LSVNADGIDL TNTTNAAGEP LGKATLTDTL
PEGWEFVDIV EGSKYLIFEG IKKSDKLVDA EDITPDTVTG LNASFNGRTA TFEFTSLAQP
YVILVKSKPT SATVAEYFSK NDTETITNSV ALKTERWTSG VTSTQNITIT SEILGKAWEL
IKAGEVRWTV DYKPYDLEQP GERLEDKLPL GIDLRMDSSG KLVLEGNITA NEMTLQADGR
YTLGDPVELR LGTNVSYDNG NRVLSFIIPN KAKAYRFSYI TDVTGEPGSV TNKVSLLGEN
SVGQENTGKS YSITAQDGSA SLLRNGSISI TKTKEGSVPF PGVEFTLYAK DGTTVIKKGV
TGSDGTLKLK VIPDGEYILR ETKVPDSSGY TLENVDHSLM FTTSGGGIVS SIDGKTGTQT
AVITIQNFQT GTVGNLKINK VVAGNDADTT KAFNFTLTLD GAAGTYAYIG HGVPGGTIKT
GDDFSLAHGQ SITIVGLPKE AAYTVTEADY SGDGYSTIST NETGNIVADT TQTASFTNSR
LEITGTKVWQ GGPAVKPEIQ LQLYRNNLPL GSPVTLNGSE TPSWIHTWTH LDKTDSDGND
YRYRIDEVKT PPNYGKSISS DGLTITNTYG SPKTAITGSK IWEGGPSIKP SIQLQLYRNG
VKQGEPVELV NGQLSHTWNG LDTTDNTGRA YTYTVDEVEV PPVYAKTVSP DGLTITNTFI
GKVEYAIDLK ADPSTIVGDG KSETVLTTRV TDDKGNPVAG VEVVFEAPLG TFLGDPRNPQ
VGKQTGVTDA NGEAQILYRS EKIEGIDPQK VPVIATVADP EKGLYATDTI YIIFEPSAIT
GVVTDNQTGK PIAGAKVVVT KDFDGDGIID FRGECITGPD GKYRVPIPKG DTVYDVEITK
SIIINGEPVD VSFKQKAEAG EVNADQGDEE FPAQETFTGV IITRDKDGRE RIAGRGTDEK
IVLKQVTAEG VGGKEAEVDS KTGVFTIEEL SKGQTYEFVM TMEVEGQELI MGKIVVQLNT
DGQISIHEEL IDPYGTITDS ETGKILGDVY VELFYADTPR NKAEGRTPHT KVILPILPGF
APNDNENPQR SASTTVFNEH PSVKDHGNYA WMVFSEADYY IKGTKTGYNT YTSPTISVDF
DVVKHDFVMQ PLDSGGDGDG GSSGGGSGGG DITPTPTEDN TKPAVPGQTP ATPGTETPEI
PEKPIDTQKP VEPQHPAKTP TDPSDRQATG TPEAGGNQGT GETPADGKGT LPKTGENGNS
GYYTLGMLFI ALGLYLGRRR TA
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