| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4271 |
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| Symbol | |
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| ID | 7261296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4520720 |
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| End bp | 4523770 |
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| Gene Length | 3051 bp |
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| Protein Length | 1016 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643564188 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_002460712 |
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| Protein GI | 219670277 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.12828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGTAA CTCGTCGTGG GTTCCTTAAG CTTTCTGGGG CATCCCTGTT TGCTTTGGCT
TCCGGTCTTG GCTTTGATCC ACAGATCGCC CAAGCCCAGG GATTTAGTCT TAGAATTGAA
GGAACAACTA AGATTCCTAG CATTTGCCAT TTCTGTTCCG GCGGGTGCGG TTTGCTGCTT
CATATTAAAG ACGAAAAACT CGTTTATCTG GATGGAGACC CGGATAATCC GGTGAATTCC
GGTGCCTTGT GTCCGAAAGG GGCCAGTTTG GGTCATGTGG CCAATGCCAA GGACCGTGTC
ACAAAGCCCA GATACAGAGC TCCCGGGTCC AGCGATTGGC AGGATATTTC CTGGGATGAA
GCGATTAATA AGATCGCCTC AAAGATCAAG GAAGTTCGTG ACACAACCTG GATGGCTACG
GAAGAAATTG GTGGTACAGC CTACAATGTA AACCGCGCTG ATGGCATTGC CGTTCTCGGT
TCAGCCGAAG TGGATAATGA AGAATCCTAC CTGATCAAGA AACTGTCCGA GCTCATCGGA
ACACCTTATA ACGAACACCA GGCCCGGATA TGACACGCTC CCACGGTGGC AAGTTTGTCA
CCTTCATTTG GCCGCGGAGC TATGACCAAT TCCTGGACGG ATATGCAAAA CACGAAATGC
TTCCTGATTG CGGGCAGCAA CTGTGCGGAG AATCATCCCA TAGCTATGCG TTGGATCAAT
AAAGCCAAAG AAAACGGCGC CAAGGTGATC GTGGTGGATC CGCGGTTTAC CCGTACCGCC
TCCCAAGCAG ATATCTTTGC CCAGGTTCGT CCCGGTGCGG ATATTGCTTA TTTAAATGCA
ATCATCAATT ATATCTTAGA GAACAAACTC TATGATCAAG ACTATGTACT CAACCATACC
AATGGGCTGT ACAAGATCAG TAAAGACTTT AAATTTGCCG ATGGACTGTT TTCCGGATTT
GATCCCGAGA CCAAAAAGTA TAATTTTGAC AGCTGGGCTT ATCAGCTTGA TGCCGAAAAC
AAACCGGTGA AAGCGGAAAG TCTGGATGAT CCTGATTGCG TATTTGGCAA GCTTAAAGAG
CATTTCTCCC GTTACACTCT GGAAGTAGGG GCCGATATCA GCGGTATACC TGCTGAAAAA
ATTAAAGAAA TTGCTGATAC CTTCTGCAAT ACCAGACCAG GCAGCATTCT TTATGCACTG
GGCATGACCC AACACACCAC CGGCGTTCAG GGAATCCGCA GTTACGCGAT CATCCAGCTG
CTTTTGGGCA ACGTAGGTAA AGCAGGCAGC GGCATCCAAG CCTTGCGTGG TGAGCCCAAT
GTTCAAGGCT CCACCGATAT GGCCAATCTC TTTAATAACC TGCCGGGTTA CTTGCCGGCC
CCGGTTCATA CGGATAAGGA TCTGCGCAGT TATCTGGTGC GCAGCGGCTC GGCTTTTGAA
AGGCATATTA TCTCTCAGCT CAAAGCTTGG TTTGGCGAAA ATGCCACCAA AGAAAATGAT
TATTGCTTTA ATTACCTGCC TAAGTACAAC TCAGGCAAGA ACTACAGCAT GGTAAAACTT
TGGGAAGCTG CCAATAGCGG ACAATTCAAA ATGCTGCTTA ATTTTGGCTC GAATTCCATG
GTATCCATCC CTAACCGGCA AATCGTCCGT GAAGGCTTGG CAAAGCTGGA TATGCTGGTC
ATCGCGGATG TTTATGAGGT TGAAACTGCC CAATTCTGGC GTGAAAAGGA TCCGACCACA
GGCGAGCTCC TGGTCAATCC GGCCAAAATC AACACAGAAG TCATCCTGCT TCCCGCAGCT
TTCGTCTATG AAAAAGGGGG CACGCTATCC AACTCCGGCC GCTGGATTCA GTGGAAGGAT
GCTGCTCTGA AGCCGCCAGG GGAAGCTAAG CCTGACCTGG ATATTCTGGA TCATATCTAC
CATAAACTTA AAGAACTTTA TGCCGGCAGT ACCGATCCTA AGGATGAACC CATTCTCAAG
GCCCGGTGGG ACTATGGTCA TGAACCGGAT CCGCTGAAAG TTCTCCAGGA GATCAGTGGT
TATGATGAAA CAACTGGTAA AGTGCTGCCT ACCCTGGCTG ATTATTTAAA AGCTCCTATC
GGCTCAGCTT CGTCAGGCTG TTGGATTTAT GCCGGTGTTA CAGGCAATGG CAACCTGGCT
GCCCGCCGGG ACAACAGTGA TCCCTCGGGG CTTGGTCTAT ACCGCAATTG GAGCTTCTCC
TGGCCGGGTA ACATCCGCAT CCTTTATAAT CGCGGCTCCT GTGATATGAA CGGTCAGCCT
CTGGATGAGA ACCGCAAGCT GATTTGGTGG GATGCGGCCA AGAATTCCTG GGAAGGCAAT
GACGGTGCCG ATGTGCCGGA CAAAACCAAA GGCCCGGATA CCCCGGAAGG GAAACAGGTT
TTCCGCATGA ATCCTGAAGG AGTAGGCCGC TTATTCACTG CGAAATATTT CAGTGGAATT
CCTGCCACAC CTGCAGCAGA TGGCTTGCCC CATATTGGCG TTAGACCGGC CGGTCAATGT
AATGACGGTC CTTTGCCGGA GTTTTATGAG CCGGTGGAAA GTCCGACGGT CAATAGTCTG
CATCCGGATG TAAGCTCTAA TCCTACCGTG CCCATCCCGA ACTTCCTGCC TGGTGTTACG
AACCATGGCA GCAAGGAAGA TTTCCCTTAT GTACTAACGA CCTATGCCTT AGTTGAGCAT
TTCTGCGCCG GCGGGATCAC GAGAAATATC CCCATGCTCA ATGAGCTGAT GCCTCAGCCC
TTTGCCGAGA TCAGCAAAAA TCTGGCCCAA AAGATCGGAG TCAAAGAAGG GGACATGGTA
GAAGTATCTT CTGCCCGTGG CAAAGTTCAA GTAGTCGCCC TGGTAACGGA CAGAATTCAG
ACCTTAAAGA TCAACGGTCA GGATTCCGAA ACCATTGGTA TGCCTTGGAG TTGGGGCTTC
GCATCCCTAA GTCCCGGACC GACGACCAAC AACCTGACCA TCAGCGCCAT CGATCCCACT
GCAGGCACCC CGGAATATAA ATGCTGCCTG GTCAACATAA GGAGGGCGTA G
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| Protein sequence | MEVTRRGFLK LSGASLFALA SGLGFDPQIA QAQGFSLRIE GTTKIPSICH FCSGGCGLLL
HIKDEKLVYL DGDPDNPVNS GALCPKGASL GHVANAKDRV TKPRYRAPGS SDWQDISWDE
AINKIASKIK EVRDTTWMAT EEIGGTAYNV NRADGIAVLG SAEVDNEESY LIKKLSELIG
TPYNEHQARI UHAPTVASLS PSFGRGAMTN SWTDMQNTKC FLIAGSNCAE NHPIAMRWIN
KAKENGAKVI VVDPRFTRTA SQADIFAQVR PGADIAYLNA IINYILENKL YDQDYVLNHT
NGLYKISKDF KFADGLFSGF DPETKKYNFD SWAYQLDAEN KPVKAESLDD PDCVFGKLKE
HFSRYTLEVG ADISGIPAEK IKEIADTFCN TRPGSILYAL GMTQHTTGVQ GIRSYAIIQL
LLGNVGKAGS GIQALRGEPN VQGSTDMANL FNNLPGYLPA PVHTDKDLRS YLVRSGSAFE
RHIISQLKAW FGENATKEND YCFNYLPKYN SGKNYSMVKL WEAANSGQFK MLLNFGSNSM
VSIPNRQIVR EGLAKLDMLV IADVYEVETA QFWREKDPTT GELLVNPAKI NTEVILLPAA
FVYEKGGTLS NSGRWIQWKD AALKPPGEAK PDLDILDHIY HKLKELYAGS TDPKDEPILK
ARWDYGHEPD PLKVLQEISG YDETTGKVLP TLADYLKAPI GSASSGCWIY AGVTGNGNLA
ARRDNSDPSG LGLYRNWSFS WPGNIRILYN RGSCDMNGQP LDENRKLIWW DAAKNSWEGN
DGADVPDKTK GPDTPEGKQV FRMNPEGVGR LFTAKYFSGI PATPAADGLP HIGVRPAGQC
NDGPLPEFYE PVESPTVNSL HPDVSSNPTV PIPNFLPGVT NHGSKEDFPY VLTTYALVEH
FCAGGITRNI PMLNELMPQP FAEISKNLAQ KIGVKEGDMV EVSSARGKVQ VVALVTDRIQ
TLKINGQDSE TIGMPWSWGF ASLSPGPTTN NLTISAIDPT AGTPEYKCCL VNIRRA
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