Gene Dhaf_4242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4242 
Symbol 
ID7261266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4491300 
End bp4491902 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content45% 
IMG OID643564160 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002460685 
Protein GI219670250 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGTTAA GGGAAAAACA AAAAGCAGAA GTTAAATCCG CCCTTATACG GGCCGGTGAA 
GAGCTTTTCG GAAACAAGGG GTTTACGGAA ACAACAGTCG AAGAAATCAC TGCCGCGGCC 
GGTGTAGCCA GAGGAACCTT CTATAATTAT TTTCAGACGA AAGAAGATTT GGCGCTGGAG 
ATATTATACG AAACAGAAGG ATTGACAACA GAGCAAGTTG ACGATTTTTT TGCCACGACT 
TTAGGGACAG AGAATCAAAT TCAGACCATC ATAACGATTG CTGTCGAGTG GACGCTGAGA 
AAACCTGAGC TTTTTCTGGT TATTTTAATT GAAAAAATGA AGCGGGGGTC AACGCCGGGA 
TATGCCAACG GGACTCTCTT CAGAAGGCTG ATCACAGAGG CTTTTGAACG TGGCCAGATG 
GCTGGCGTGG TAACCAGGGA GCGACCGGCA CAAGAGCTTG CCCATGATAT TGATGGATTA 
TATATGGTTC ACATGGTGAG ATGGTACCAT TATGGCAAGC AGGGCGATCT CTTATCCATT 
CTTCTAGCCG CTGTTAACAC TTACTTATCG GGTGCGATAG TAAAACAGAA GACATCCTAT 
TGA
 
Protein sequence
MKLREKQKAE VKSALIRAGE ELFGNKGFTE TTVEEITAAA GVARGTFYNY FQTKEDLALE 
ILYETEGLTT EQVDDFFATT LGTENQIQTI ITIAVEWTLR KPELFLVILI EKMKRGSTPG 
YANGTLFRRL ITEAFERGQM AGVVTRERPA QELAHDIDGL YMVHMVRWYH YGKQGDLLSI 
LLAAVNTYLS GAIVKQKTSY