| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4160 |
|---|
| Symbol | |
|---|
| ID | 7261180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4406201 |
|---|
| End bp | 4407181 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643564076 |
|---|
| Product | putative cell wall binding repeat 2-containing protein |
|---|
| Protein accession | YP_002460604 |
|---|
| Protein GI | 219670169 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2247] Putative cell wall-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAAAA GAATATTAGG ATTAATTTTA AGTTTCGTTC TTGCGTCTTC AATTGCTTTC
CCAGTCTATG CTTCAAACTC ACCAGCAATA ATCCGATTAG CAGGAGATGA TAGATATGCT
GTATCGTCGG CAATTGCTCA ACAGTGGGGT CAGTCCGATT ATGCAGTTTT AGCTTGCGGC
AATGATTTTC CCGATGCATT ATGTGCCGCT CCTCTTGCGA AGAAATATAA GGCGCCCATT
TTGTTAACTG CCACGAATAA TTTACCAGAT ACAACAAAAC AAACCTTAAT AAGGTTAAAT
GTTAAAAATG TTTTTATCAT TGGTGGAACA GGGATTATTT CTGCGAATGT TGAAAATCAA
CTGAATTCAA TGCAGATCCA AACAGTGAGG ATATATGGGA CAGACCGATA TGACACTTCT
GTTAAGATAG CGAAGCAATT GGATACTCCG ACACAATTGG TTGTCTGCAC CGGCAATAAT
TTTTCGGATG CCCTATCAAT GGCCCCAATT GCCGCTATAA AACAGATCCC TATAGTATTA
GTCCCTAAAA ATTCTCTGCC AGATTCAACA AGGGAATATA TTTCTTCATT AAATGGTGTA
ATAAAGACCT ATGTGATTGG TGATTCCAGC ATAATCTCAG ATAGTATTGT TGACCAGCTT
CCCAATGCGG AAAGAATTAC CGGTTCGAAT AAGTATAGCC GTAATGTGGC TATTAATCAA
AGATTTGATA GTACATTAGG GAAAGATAAA GTTTGTTTAG CCACTGGAGA AGATTTTGCA
GATGCTTTGA CAGGGGCTGT ATTTGCTGCT GAAATGTCAG CGCCTATTAT TCTGGTTAGA
GGGGTTAATC CTAGTGAGAC AAAAAGTTAT TACTGGGCCG GATTAAGCGA CATTAATACT
GTTTATGTTT TGGGGAGCCC CGACAATATT TCGGACAATT TTATTAGTAA CTCAACTTTC
GCACCCCAGT TGAGGGAATA G
|
|---|
| Protein sequence | MRKRILGLIL SFVLASSIAF PVYASNSPAI IRLAGDDRYA VSSAIAQQWG QSDYAVLACG
NDFPDALCAA PLAKKYKAPI LLTATNNLPD TTKQTLIRLN VKNVFIIGGT GIISANVENQ
LNSMQIQTVR IYGTDRYDTS VKIAKQLDTP TQLVVCTGNN FSDALSMAPI AAIKQIPIVL
VPKNSLPDST REYISSLNGV IKTYVIGDSS IISDSIVDQL PNAERITGSN KYSRNVAINQ
RFDSTLGKDK VCLATGEDFA DALTGAVFAA EMSAPIILVR GVNPSETKSY YWAGLSDINT
VYVLGSPDNI SDNFISNSTF APQLRE
|
|---|
| |