| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4121 |
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| Symbol | |
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| ID | 7261141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4369857 |
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| End bp | 4370612 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643564038 |
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| Product | protein of unknown function DUF1078 domain protein |
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| Protein accession | YP_002460566 |
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| Protein GI | 219670131 |
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| COG category | [N] Cell motility |
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| COG ID | [COG4786] Flagellar basal body rod protein |
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| TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00427548 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAAAG GATTATATAC AGGGGCGGCG GGAATGCTTG CTGCTCAGAC CCAAAGCGAG
ATTATCGCGG ATAACGTCGC AAATATCAGG ACTCCGGGTT ATAAAGGGGA GGAGTCCAGC
AATAAAGCCT TTCCCGAAAT GCTCATGATG AGAACAAACA CGGAAAACGA AATCCCGGGC
AATACATTAA TCGGCGGTAT AGGTACCGGG GTTGTCGTCG ATCAGATTAC GCGGATGAAT
GTTCAGGGAG TTCTGCAAAC CACGGACATT CCTACGGATC TGGCCCTCAC TGCTGAGGAA
GTTTTCTTGG TGGTGGATAC CCCCAACGGT GAGCGCTACA CCCGTAATGG ACAGCTGCAA
CTGAATTCTG AAGGAATGCT GCAAACAGCC GATGGCTATC CTGTTCTTGG TGAAGAGGGG
CCCATTGGAC CGTTAAGCAA GAATTTCCAG GTGGATGCTC AGGGGGGAAT CACCGATCAG
GGGGTCACTA TGGACCGCTT GCGATTGGTG CAAATCCCGG CGGTCGGCCT TCTTCGCGAA
GGACAGTCTC TGTATGCCTC TAATCAGCCG GTACAGGACT TTGCCGGTAA TGAGGCCGTG
CTTCAGGGGA CGCTGGAGGG ATCCAATGTG AATTTGCCAG GCCAGATGGT TAAGATGATC
ACAGTGATGA GAGCCTATGA AGCGAATCAA AAGGTGATCC AAACCCATGA TGCAACTTTA
GAAAAGGCTG TTAACGAAAT TGGTAGAATT GTATAA
|
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| Protein sequence | MIKGLYTGAA GMLAAQTQSE IIADNVANIR TPGYKGEESS NKAFPEMLMM RTNTENEIPG
NTLIGGIGTG VVVDQITRMN VQGVLQTTDI PTDLALTAEE VFLVVDTPNG ERYTRNGQLQ
LNSEGMLQTA DGYPVLGEEG PIGPLSKNFQ VDAQGGITDQ GVTMDRLRLV QIPAVGLLRE
GQSLYASNQP VQDFAGNEAV LQGTLEGSNV NLPGQMVKMI TVMRAYEANQ KVIQTHDATL
EKAVNEIGRI V
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