Gene Dhaf_3964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3964 
Symbol 
ID7260984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4206929 
End bp4208011 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content52% 
IMG OID643563885 
ProductSaccharopine dehydrogenase 
Protein accessionYP_002460413 
Protein GI219669978 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1748] Saccharopine dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCGTA TAGGGGTTTT AGGTGGTACG GGTGAAATCG GCAGCAGAAT AGTGAACCTG 
CTGAAGGGTG AATACAGCCT GATGGCTTCC TATCATAGCC AATCCAGACC ATCTGCCGCC
GGTTGTGAGT ATGTAAAGCT TGACATTGCC GATGCTGAGC AGCTGCAGCA CTTCTGCCGG
CAATGCCATG TCCTGATCAA TTGCGCAGGG GCGTCTTTCC TCAATGGTGA GAAGGTGGCC
CGGATGGCTG CCCACTGGCA GATCCCTTAT ATTGATCCTT CGGGGGAGGC CTTTCTGGAA
GAGCGGCTGG AGGACAGAAA GGATAAGGCT GTCTTTGTGC TGTCCGCCGG CTATTTCCCG
GGGATGAGCG GGCTGCTGAT GCGGCATGTC TGCGAGTCCT TTGACACTCC GGAGACCATC
AGCGGCTTAA GCGTAAGCGA AGAAATACCC AGCATGTCGG CTATCGAAGA TTTTATTCTC
ACCAATTTAT CCGGTTTTGG GACGGCACTC AGCTATTATG ATCATGGCGC TGTGGTCAGG
GATGAAGGGG AAAGGCTGGA AAGGATCAGG GGCAGGGAAT TCCGCTTTCA AAATTACCTG
ACCGTTGAAA CGGCAAGGGT TGCGCAACAC TATGGGCTGA AGGAAGCCCA TTGGTACCAT
TCATCCTTTG GCGACCAGGT TATCCGCAAA TTGCAGGAGG CGGTCATCCA GTATAAGTTG
GAAAGAGCTG GATACAAAAG CATTGTCCGG GAAGTGATTG AGATATTCCG GCAAACCATG
GCAGGCCGTG AATCCTTCAG TTATACAAGG ATTGAGGGGC AAGGGCTGCT GGGGAAGGAG
CGGACGCTGA TGACGGCGGA GGTATCCAGT GATTGCAGCA GCGAGATCAG CGCCATCATA
GCCGCTTATG CAGCGAAGGC GGTTTTGGCG AAGCCTTTAC CCCCTGGCAT CCATTACGCC
ATGGACATTA TCAATATGGA GGAAATACTC AAGGATCTTG CTGAGCTGAA GGCAGAGATC
CGGATCAGTA AGGTAGTTTT GGAACAGGAG GTTGATGATG AGTATGAAGA AGGGGAATTG
TAA
 
Protein sequence
MHRIGVLGGT GEIGSRIVNL LKGEYSLMAS YHSQSRPSAA GCEYVKLDIA DAEQLQHFCR 
QCHVLINCAG ASFLNGEKVA RMAAHWQIPY IDPSGEAFLE ERLEDRKDKA VFVLSAGYFP
GMSGLLMRHV CESFDTPETI SGLSVSEEIP SMSAIEDFIL TNLSGFGTAL SYYDHGAVVR
DEGERLERIR GREFRFQNYL TVETARVAQH YGLKEAHWYH SSFGDQVIRK LQEAVIQYKL
ERAGYKSIVR EVIEIFRQTM AGRESFSYTR IEGQGLLGKE RTLMTAEVSS DCSSEISAII
AAYAAKAVLA KPLPPGIHYA MDIINMEEIL KDLAELKAEI RISKVVLEQE VDDEYEEGEL