| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3942 |
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| Symbol | |
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| ID | 7260962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4183712 |
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| End bp | 4184452 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643563864 |
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| Product | CRISPR-associated protein Cas6 |
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| Protein accession | YP_002460392 |
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| Protein GI | 219669957 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00000148244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAG AGATTTATTT TAAACCTTTG CGGGAACCGG TTGTATTGCC TATTCACTAT
AATTATTTGG TTCAGGCAGC GTTGTACAAT TCCATTGATC AGGAGCTGGC GGCTTTTTTG
CATGAGAAGG GCTATAGCGA CGGAAACCGC GCCTTTAAGC TGTTTTGTTT TTCTTTAATC
CAGGGTGTGT ATCAAATGGA TAGGGTGAAT AAAAGGATTG CTTTTGAAGG AGAGCTGAAG
TTGACGGTAT CCTCTCCGCT GCAGGATTTT TGCCAGTCCC TGGTCAATGT GCTGCTTACA
AAAGGGGTTA TGCGCTTAGG GGCCCAGGAG CTGGAGATCG ATAGAATAAG TGCCGGTCAG
TATAAGGTGA GAGAAAATAA GGTTATGGTG AGAACCCTTT CCCCGGTGGT GCTGTACAGT
ACGCTGCTCA GGCCGGATGG CAGGAAATAT ACGGTCTACT TTCAACCGGG AGAAACGGAT
TATAGCCGTT TATTCAATGA AAATCTGCGC AAGAAATACC GGGCCCTCTA TGGATCAGAA
GGACCGGAAG GGGAAGTGGA AATCCGACCG CTGGGAATAC AAAGGATGAG GATCGTCAAT
TATAAAAACA CAGTAATTAA AGGGTATGCC GGTAAGCTGC TTTTATCGGG GCCGAAAGAG
CTGCTTCAGT TGGCCGTCGA TGGAGGAATA GGAAGTAAGA ACAGCCAGGG GTTCGGGTGT
GTGGAGATTA TCAATGGATA G
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| Protein sequence | MNLEIYFKPL REPVVLPIHY NYLVQAALYN SIDQELAAFL HEKGYSDGNR AFKLFCFSLI
QGVYQMDRVN KRIAFEGELK LTVSSPLQDF CQSLVNVLLT KGVMRLGAQE LEIDRISAGQ
YKVRENKVMV RTLSPVVLYS TLLRPDGRKY TVYFQPGETD YSRLFNENLR KKYRALYGSE
GPEGEVEIRP LGIQRMRIVN YKNTVIKGYA GKLLLSGPKE LLQLAVDGGI GSKNSQGFGC
VEIING
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