| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3920 |
|---|
| Symbol | |
|---|
| ID | 7260941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4158177 |
|---|
| End bp | 4158899 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643563843 |
|---|
| Product | 5-amino-6-(5-phosphoribosylamino)uracil reductase |
|---|
| Protein accession | YP_002460371 |
|---|
| Protein GI | 219669936 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGAC CTTATATTTT CTGCCATATG ATGACTTCTC TTGACGGTAA AATTATGGGG
TCATATATGG ATACCCCCGA AGGAGAGGCC GCCGGTAAAG CGTTTTACAA CATTGCTTTC
GGCAGCAATC CCCACTACCA GCATCAAGGC TGGCTGTCCG GCCGTATGAC CACAGATGAT
AACTTTACCT TCTACAAACC ACCTGTTCTG GATGAGGAAG CTCCTCCGGT CCCCGAGGGA
GACTTTGTGG CTTTGCCCAA TGCTCCCATG TATTATGTAT CGGTGGATCC TTCCGGCAAG
CTGGGCTGGG AAAACAGCCA GCTTACCTAT GAGGATACGA CTGCTCATGT TCTTGAAGTG
TTGACCGAAA AGGCCGGTAA TGCCTATAAA GCCTTTCTGC TCAAGCTGGG CATCTCCTAT
ATCATCGCCG GCAAAGACGC TTTGGATTAT GCCCTGGCCA TGGCGAAGCT CAAAAGCCTC
TTTGGTATCC AGAGCTTGAT GCTGGGCGGT GGGGGCGTTT TGAACTGGTC GTTTATTCAG
GCCGGCATGT GCGACGAGCT GAGTGTTCTG ATTGCCGCCG CCGCCGATGG TTCCTCGGAA
ACTCCTACCT TATTCGAAGC ACGAAGCGGC CTGGCTGCTG AGAGCCCTGT CGGTTTCACC
TTAAAAAGTG CCGAAGTCAA AGAAGGGGGA AGTGTGTGGC TGCGCTACAC TGTGAACAAG
TAA
|
|---|
| Protein sequence | MSRPYIFCHM MTSLDGKIMG SYMDTPEGEA AGKAFYNIAF GSNPHYQHQG WLSGRMTTDD
NFTFYKPPVL DEEAPPVPEG DFVALPNAPM YYVSVDPSGK LGWENSQLTY EDTTAHVLEV
LTEKAGNAYK AFLLKLGISY IIAGKDALDY ALAMAKLKSL FGIQSLMLGG GGVLNWSFIQ
AGMCDELSVL IAAAADGSSE TPTLFEARSG LAAESPVGFT LKSAEVKEGG SVWLRYTVNK
|
|---|
| |