| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3692 |
|---|
| Symbol | |
|---|
| ID | 7260713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3924576 |
|---|
| End bp | 3925889 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643563616 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002460144 |
|---|
| Protein GI | 219669709 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0000807501 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATAGAA CAGCGATAGA AGAATTGCAT AGATGGAAAG CCAAGCGGAA TAAAAAGCCG
CTTATTATCC GCGGCGCCAG GCAGGTCGGC AAAACCTGGC TTATGAAGGA GTTTGGCAGG
GTCGCCTTTG CAAAGACTGT CTACATCAGC CTTGACAACA ATCGGCGCAT GAAGGAGTTG
TTTTCAGCCG ATCTGGATGT GGAACGGATC GTGACAGGGT TGGAACTCTA TTCCGGCCAA
AAGATTGATC CCGCCAATAC GTTGCTTATC TTCGATGAAG TACAGGAAGT GCCAACGGCC
CTGACTTCGC TTAAATACTT TAACGAGAAC GCTCCCCAAT ATCAGATTAT AAGTGCCGGT
TCACTCCTGG GCGTGGCGCT GCATCAGGGA ACATCATTCC CTGTGGGCAA GGTGGAATTT
TTGGACTTAT ATCCCTTAAG CTTTACAGAG TTTTTAAATG CTATGGACAA AGGTCGATAT
GTAGAACTAT TGCAAAAAGG CGACTTTGAT ATGATAGCCA CTTTTAAGCA GACTTACGTT
GATATGCTCA AATATTATTA CTATGTGGGC GGCATGCCGG AGGTCGTACA AAGCTTTTCG
GAAACTAAGG ATTTTGGTGA GGTGCGGGAA ATACAACAGC GTATTCTTGA TGCCTATGAG
CAGGATTTTT CCAAACACGC GCCCCATGAT GTTGTGCCGA GAATCCGTAT GCTTTGGAAC
AGCATTCCCG CCCAGCTCAC CAAGGAAAAT AAGAAGTTTA TCTATGGCCT AATCAAAGAA
GGTGCGCGGG CTAAGGAATA CGAGCAGTCC ATGCTTTGGC TGACCGATTG CGGCCTTGTT
CATAAGGTGC ATCGGGTGAA TGCGCCCAGC CTGCCGCTAA AAGCCTATGA GGACTTGAAA
GCCTTTAAGC TGTTCCTTGT GGATATCGGT CTGCTTTCCT GTATGGTACG ACTGAACCAA
GGCACTCTTT TGGATGGTAA CGAGCTTTTC AAGGAATTCA AGGGCGCGCT GACCGAACAG
TATGTATTGC AGCAGCTAAG AACCCTTAAA GAGCTGGAAG CCTATTATTG GACAAACGAC
CGCGGTAGCG CCGAGATCGA CTTTGTTGTG GATGACGGAC ATAAGGTCAT TCCCATTGAA
GTAAAAGCAG AAACGAATCT GAAGGCGAAA AGCCTGAAAA TGTATCAGGA AAAATTTCGA
CCGGAGCTCT CCATCCGCGC CTCCATGGCT GATTATAGAC GCGAGAACAG GCTGCTAAAC
TTGCCTTTAT ATATGGTTGA AATGATGGGC TTATTGTTGA AAGAAGCTGA ATGA
|
|---|
| Protein sequence | MYRTAIEELH RWKAKRNKKP LIIRGARQVG KTWLMKEFGR VAFAKTVYIS LDNNRRMKEL
FSADLDVERI VTGLELYSGQ KIDPANTLLI FDEVQEVPTA LTSLKYFNEN APQYQIISAG
SLLGVALHQG TSFPVGKVEF LDLYPLSFTE FLNAMDKGRY VELLQKGDFD MIATFKQTYV
DMLKYYYYVG GMPEVVQSFS ETKDFGEVRE IQQRILDAYE QDFSKHAPHD VVPRIRMLWN
SIPAQLTKEN KKFIYGLIKE GARAKEYEQS MLWLTDCGLV HKVHRVNAPS LPLKAYEDLK
AFKLFLVDIG LLSCMVRLNQ GTLLDGNELF KEFKGALTEQ YVLQQLRTLK ELEAYYWTND
RGSAEIDFVV DDGHKVIPIE VKAETNLKAK SLKMYQEKFR PELSIRASMA DYRRENRLLN
LPLYMVEMMG LLLKEAE
|
|---|
| |