| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3605 |
|---|
| Symbol | |
|---|
| ID | 7260623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3828119 |
|---|
| End bp | 3829444 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643563527 |
|---|
| Product | nucleotide sugar dehydrogenase |
|---|
| Protein accession | YP_002460058 |
|---|
| Protein GI | 219669623 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTT GTGTCGTCGG CGCAGGATAT GTGGGCTTGG TCTCAGCCGC GATTCTGGCT
GACTGGCAGC ATAATGTGGT ATGCGTTGAT CACAATGAAC AAAAAATTGA GGACCTTTTG
GCTGGTAAAC TGCCGATCTT TGAGCCGGGG CTTCAGGAAT TGGTGGAACT TAATAGGCGC
AGGCAATATC TGCGCTTTAC TGCAGAAATG GCGGAGGCAC TGAGGGGATG TGAGATGATC
ATCGTCGCCG TGGGAACTCC CCCTGCAGAA AACGGACATC CCAATCTGGA AGACTTTTGG
GCGGTAGTCA AAAGTTTCCG GGAGAATGTG GGCAATAATG TGATCGTCAT GATCAAAAGC
ACTGTACCGG TGGGAACCGG TGAGGCGGTT TCCCTGTATT TAAATGAAAA GGTCAGTCAT
ACATTTTCCG TAGTCTCTGC ACCGGAATTC TTGCGTCAGG GAACAGCCGT CCATGACTTT
CTTCATCCCG ACCGTCTGGT TGTGGGCTGT ATGTCACCGG AAATCAGGGA GCAAATGAAG
GAACTGTTTC AGCCCTTGGA TTGTCCTAAG GTTTTCACCG ACTGGCATAG TGCGGAGATG
ATTAAATATG CTTCCAACAG TTTTTTGGCC TTGAAAATTT CTTATATCAA TACCATTGCT
AATTTATGTG AAGCTGTGGG AGGCAATATC CAGGATGTGG CTGCAGCGGT CGGTCTGGAC
CACCGCATTG GTCAGGCTTA CCTGAAGCCG GGAGTAGGCT TCGGGGGCTC CTGTCTGGCT
AAAGATACCC AGGGGCTGAT CGCTCAGGGT GAGGTTCACG GTGTCAATGT CTGGATGTTC
AAGGATGTGC TGGAGGTCAA CTATGAGCAG CGGGTACACA TTGTTCAGCG GCTGACCGAG
GTGCTGGGCA ACCTGAAGGG CAGAAAAATC GCCATCCTGG GTCTGGCCTT CAAAGCCAAT
ACGGATGATC TCAGGGACGC TCCTTCGGTA ACGATTATTG CCCAGATTAT CAAACTGGGA
GGACTGGTCA AAGTCTATGA TCCCGTTGTG GATAGTTCGA GCTTGCCTAA TATCATTTCT
GTAAGTACTG CGGACAATCC CTATGCAGCA TGCCAGGGCG TCGACGCCGT AATTGTGCTG
ACGGAATGGG AGGAATTCCT GGATCTTGAT CTGAAGCGTC TGCAAAAGAG CATGAATGCC
CCTGTATTTA TCGACGGGCG TTATCTCTTT GAACGGAAAA GATTGCTGGA GGCAGGCTTT
TTCCTTCCCG AGCGGCCCTC TTCCAGCGAG TGGCCTGTCG TGCAAAGCAT GATTTCAGCC
CGTTAA
|
|---|
| Protein sequence | MKICVVGAGY VGLVSAAILA DWQHNVVCVD HNEQKIEDLL AGKLPIFEPG LQELVELNRR
RQYLRFTAEM AEALRGCEMI IVAVGTPPAE NGHPNLEDFW AVVKSFRENV GNNVIVMIKS
TVPVGTGEAV SLYLNEKVSH TFSVVSAPEF LRQGTAVHDF LHPDRLVVGC MSPEIREQMK
ELFQPLDCPK VFTDWHSAEM IKYASNSFLA LKISYINTIA NLCEAVGGNI QDVAAAVGLD
HRIGQAYLKP GVGFGGSCLA KDTQGLIAQG EVHGVNVWMF KDVLEVNYEQ RVHIVQRLTE
VLGNLKGRKI AILGLAFKAN TDDLRDAPSV TIIAQIIKLG GLVKVYDPVV DSSSLPNIIS
VSTADNPYAA CQGVDAVIVL TEWEEFLDLD LKRLQKSMNA PVFIDGRYLF ERKRLLEAGF
FLPERPSSSE WPVVQSMISA R
|
|---|
| |