Gene Dhaf_3575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3575 
Symbol 
ID7260593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3799949 
End bp3800983 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content49% 
IMG OID643563497 
Productprotein of unknown function UPF0118 
Protein accessionYP_002460028 
Protein GI219669593 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00192559 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAG AAAAATGGCG CTGGATTTTT CTCATTATTA TTGTTTTGTT AGGTTTGCTC 
CTGATTCTTT CGGTGCGCCC TATCTTAAGC CCGTTTATGC TGGCTTTTGT CCTGGCCTAT
TTATTGGCCC CTGTCGTAGA AGCTTTGGTG AGACGGGGAG TGGGGCGGAA AATATCCATT
GCTTTGGTGT TTGTCGGAAT TCTCCTGAGC CTCGCTCTGC TCATCTTCAT CGTTATCCCT
AAGCTTTACA TAGAACTGTC CAAACTGTCC CAGGTGCTGC CGGAGACCGT CCGGACCCTG
GAATTGGTCA TTCAGGATTT TCGGGCCAAC TTCAGAGCTA CAGGGCTTCC CCATCAGGTG
GTCAGTGTCC TGGACGAACA TTTAAGTGAA GGCGAGTCCT TCCTAATCCA TTGGCTGGAA
GAATTTCTGG ATAATCTGCC TAAGGCCTTG ACTTCCATGA GCCTTTTTAT CCTTTCTCCG
GTCATAGCTA TCTACCTATT GGCTGATTGG CAACGTCTCC AGGCAGGGTT TTTAAGGTTA
GTCCCTCAGC GCAAGCGGGT AGCCTGGCAA AGAGTGGTTC AGGATATCAG CCATATTGTC
CGCAGCTTTA TCCGGGGCAA TGTTATCGTG GCCTTGATCG TTGGGATTCT CACCGGTGTA
GGAGTAAAGT TGGTAGGCAT GGATTATGCC TTACTGATCG GGGTGATTTG CGGAGTCTTT
GATCTGATTC CTTATTTTGG CCCTTTGATC GGCGCTGTTC CTTCGGTGCT GCTGGGATTG
ATTCAATCCC CCATGATGGC CTTAAAAGTC GCCATAGTTA TCCTGATCGT ACAACAGCTG
GAAAGCAGCA TTATCTCCCC GAAGCTCATG GGAGACAGCG TAGGGCTGCA TCCTTTGTGG
ATTATCTTTG CCCTCCTGGC GGGAGGAGAA ATCGCCGGCT TTTGGGGGAT GCTGTTTGCA
GTACCTTTTG CCGCCGTATT GCGGGTGATC ATCCGGCATA TCTACTTCTG GCTGGTTTCC
CCTGAGATGA AATGA
 
Protein sequence
MKKEKWRWIF LIIIVLLGLL LILSVRPILS PFMLAFVLAY LLAPVVEALV RRGVGRKISI 
ALVFVGILLS LALLIFIVIP KLYIELSKLS QVLPETVRTL ELVIQDFRAN FRATGLPHQV
VSVLDEHLSE GESFLIHWLE EFLDNLPKAL TSMSLFILSP VIAIYLLADW QRLQAGFLRL
VPQRKRVAWQ RVVQDISHIV RSFIRGNVIV ALIVGILTGV GVKLVGMDYA LLIGVICGVF
DLIPYFGPLI GAVPSVLLGL IQSPMMALKV AIVILIVQQL ESSIISPKLM GDSVGLHPLW
IIFALLAGGE IAGFWGMLFA VPFAAVLRVI IRHIYFWLVS PEMK