| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3549 |
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| Symbol | |
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| ID | 7260567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3773359 |
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| End bp | 3774420 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643563472 |
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| Product | Tfp pilus assembly protein ATPase PilM-like protein |
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| Protein accession | YP_002460003 |
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| Protein GI | 219669568 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 61 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTAGAA AGAAAAAGTG GGTGGCCTTG GTCCATGGCC AGCATTGGAC GGTGGCCAAA
GTCTCACGGC ACGGGAATAA GCTGAAGATT CATGGTCTTT TTGAGTATAG AGGAGAGGGC
TTGGCTCCTG AGGGTATGAA CATGGTTACA GAGCAGGAGG AAGTGCTTGG GCAGACCCAG
GCTGGGCAAG GAGCGGCGCT TGGTCTGAGA GGTTTAAAGC AATGGGCGGA CAAAGAGAGA
ATACCCCTGA AAAAGCTGAA CTATGCCCTT TCCTGCCCAG GTGTGATCAC GCGCATGATC
ACTCTTCCTA TATTATCCTA TAAGGATTTG GAGAAGCTGC TGACAGAGCA GGTGGATCAA
TATTTTACAT TGAATATTTC CGATTATCTG GTGGACTACC GGATTTTAGA AAGGATCAAA
GAAGAGGATC AGGAACGGCT GAGGGTCCTT TTGGTGGCAA TCCCCTTTTC GGAATGGTCC
AAACAGTGGC AGATATGGGA ACAGCTCGGG GTCACTCCCA AGGTCACTGA TTTTGCGGCA
GACAGTTTAT GCCGGTTGTA TAGCCGCTTA TCCAAATGGG AGGAGAATAA ACGGCAAGCT
TCGGCAAGGG ATTTAGCGGT GGTGGATTTG GGGGCTGACC GGGTGGAGTT TGTTCTTTTA
GAGCATGGTG TGCTGTTTCT GTATTCGGAT ATGGGAATTT CTCTTGATGG GCTGAATGAG
CAGGATGAGG CGAAGGAGCG GACTGAAGGT GTTGACGGGG CCGACAGAGT TTATCAAAGT
GAGTTAGAAG ATAATTTAGT CCCTGTATTT AATGCCTTAA GCGAGTTTTT GAACTTTTTT
GCTTCCCGCC ACTATGGCAA GACGGCGGAT CAGATTTTTA TTACAGGGGA GTGTGCGGAT
TTTCCCGGCT TGGAAGAAAT TTTCGAAAGG AATATGGGTA TTCAGGCCAA AGTAGGTTTT
CCAGGGGACT GGATGCCGGT CTTCAATAAA AAGTCCAGAC ATTTGGTGAA TCAAGGGATA
AAGTATGGAA GCTTGTATGG GCTGGCCTTC CGGGAGGATT AA
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| Protein sequence | MIRKKKWVAL VHGQHWTVAK VSRHGNKLKI HGLFEYRGEG LAPEGMNMVT EQEEVLGQTQ
AGQGAALGLR GLKQWADKER IPLKKLNYAL SCPGVITRMI TLPILSYKDL EKLLTEQVDQ
YFTLNISDYL VDYRILERIK EEDQERLRVL LVAIPFSEWS KQWQIWEQLG VTPKVTDFAA
DSLCRLYSRL SKWEENKRQA SARDLAVVDL GADRVEFVLL EHGVLFLYSD MGISLDGLNE
QDEAKERTEG VDGADRVYQS ELEDNLVPVF NALSEFLNFF ASRHYGKTAD QIFITGECAD
FPGLEEIFER NMGIQAKVGF PGDWMPVFNK KSRHLVNQGI KYGSLYGLAF RED
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