Gene Dhaf_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3293 
Symbol 
ID7260309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp3524038 
End bp3524640 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content50% 
IMG OID643563214 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002459747 
Protein GI219669312 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000151669 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCCGG AGATTCATAT TCCCGAAGAT AAAAAGCAGC GGATCATCCG CGCAGCCCTG 
GAGCACTTTG CCAAAAACGG CTACAAAAAA ACAACCATGG ACGAAATCGT CGCCGCGGCG 
GATATCTCCA AGGGCCTGAT TTTCCACTAT TTTGGCAACA AGAAAAAGCT GTACCTCTAT 
CTCTATGAAT TTGTCTACGG CCTTGTCTAT GACCGCATCG TCAAGTCCTT CGAGCAGGAA 
GACCTGTTTG AGCGCATCCG CGAATCGGAG CGGATCAAAC TGGCTGTGGT CAACGAATAC 
CCCTATGTGT TGGACTTTCT CCTCTCGGTC CGCAGGGAAA CCGACGAATC CTTGCGAGAG 
GAACTTTCCC GGGTTAAAGT GAAGAGCTTT CCGCCGTGGC AGGAAACCTT TCTGCCGGGG 
CTTGACACAT CCAAATTGCG GGAGGGCATC GATCTGGAGA AAGTGACCAA AATTATTTCC 
TGGACCACCG ACGGGCTTCT GTCCGAGCAC AAGGACGACT TCGTGCTGGA GGATATTTTT 
GTGGAAATGG ATGAATACCT TAATCTGATG CGCAAAGCAT TTTACAAGGA GGAGTACCAA 
TGA
 
Protein sequence
MMPEIHIPED KKQRIIRAAL EHFAKNGYKK TTMDEIVAAA DISKGLIFHY FGNKKKLYLY 
LYEFVYGLVY DRIVKSFEQE DLFERIRESE RIKLAVVNEY PYVLDFLLSV RRETDESLRE 
ELSRVKVKSF PPWQETFLPG LDTSKLREGI DLEKVTKIIS WTTDGLLSEH KDDFVLEDIF 
VEMDEYLNLM RKAFYKEEYQ