Gene Dhaf_3200 details

Gene Information

• Locus tag: Dhaf_3200
• ID: 7260216
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: -
• Start bp: 3425719
• End bp: 3427665
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 643563123
• Product: glycogen branching enzyme
• Protein accession: YP_002459656
• Protein GI: 219669221
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0296] 1,4-alpha-glucan branching enzyme
• TIGRFAM ID: [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 51
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTGGG TAGGAGAGGA TAACGCATTG CAGGTTCAAG ACATCAAGAT GCAGTCAAAA 
ATACAGAAGG ACAGCCCTTT GCTCACCCAA GAAGAGATGT ATCTCTTTAA TTGTGGTGAG 
TTTTATTATA GTTACCGCAA ACTCGGTGCT CATTTCCTAG AGCATAAGGG GCGGTGGGGA 
ACGTATTTTG CCGTATGGGC TCCTCAGGCC AGGCAAGTCT CTGTAGTAGG GGATTTTAAC 
GGCTGGTGCG GAATGAACCA TTCTCTGCAA AAATGGGAGG AACAGGGAAT TTGGACACTC 
TTTATTCCCG GCCTGCCCAC AGGGGAGATC TACAAATATG AAATCCTCAA CTCTTCAGGA 
GAGTCGGTGT TGAAAGCGGA CCCCTACGCC TTTTTTTCCG AAGTGCGGCC CCATACAGCT 
TCGGTGATCT ATTCCCTGGA GGATTATGCA TGGGGGGATC AGGCTTGGCT GGCTCAGCGC 
AAAACCAGGA ATCCCAAAGT GCTGCCCTTG TCCAGCTACG AAATCCATTT AGGCTCATGG 
AGAAGAACAG AAGACGGACG GTTCCTTAAT TATGCTCAAC TGGTAACCGT GTTGATCCCC 
TATGTAAAAT CGCTGGGCTA TACTCATATA GAGATCCTGC CGCTGATGGA GCATCCTTAT 
GACGGCTCCT GGGGTTATCA GATCACGGGA TTCTATGCCT GCACCAGCCG GTATGGCACC 
CCCCATGATC TGATGTACCT GATCGACCAA TGCCATCAGG CGGGAATCGG TGTGATCCTG 
GATTGGGTCC CGGGCCATTT TTGCATGGAT GCTCACGGTC TGGGCAAATT TGATGGAAGT 
CCTCTCTATG AGAGAGAAGT TCATGAGCAA TGGGGTACTT ATAAATTCGA TTATTCCCGT 
TCGGAAGTCC GGAGCTTCCT GATCTCCAAT GCAGTCTTTT GGCTGGACGT CTTTCATGTG 
GATGGCTTGC GGGTGGACGG AGTGAGCAGC ATGCTCTATT TGGATTACGG GAAAGAAAAA 
GGAGCCTGGC AGCCCAACAG ATATGGCGGC CGGGAAAATC TGGAGGCCGT CGGCTTTATA 
AAACAGCTCA ATGCAACCCT TCATGGCCTT TATCCCGACG CCTTGCTCAT AGCCGAAGAA 
GCTACGGATT GGCAGGGGGT GACCGGGCCT CTTGATCAGG AAGGACTGGG GTTCACGTTT 
AAATGGAATA TGGGCTGGAT GAATGATACC CTCCGTTATA TTGGCCTGGA CTTCAATGAA 
CGCAGATCCT TTCATCAGCT CTTAACCTTT CCCATGATGT ATGCCTATGC TGAGAGCTAC 
ATTCTCCCGT TGTCCCATGA TGAGGTGGTC CATGGCAAGA AGTCCTTACT GGATAAAATG 
CCGGGAGATT ACGGACAGAA GTTTGCAGGT TTAAGGGGAC TAACCACCTA TTTCATGACC 
AGTCCCGGCA AAAAGCTGCT CTTTATGGGG GGAGAGATCC CTCAGTTCAT CGAGTGGCGG 
GAAGATCGGG AGCTGGACTG GTTTCTTATG GATTATGAGC TGCATAGAAA ATACCATGGC 
TTTGTTCAAC AGCTCAATGG GCTGTATTTG CGGGAAAAGG CCTTATGGGA AATCGATGGG 
GACTGGACCG GATTTGAATG GATCGATGTC CATAACCATG AACAGGGAGT GATAGTCTTT 
TGCCGCAAGG GAAAGTCCTT TCAGGACAGG CTGGTGGTTC TGATCAATTT TCAGCCTTAT 
AACTATGAAA GGTATCGAAT CGGAGTGGAA ATGGCCAAGG GTTACCGGGA AATACTGAAC 
ACCGACTCGA CAGACTTCGG TGGATGGGGT ATGACCAATC CCGGGCTTTT AAAAGTAGAG 
GGAGTACCGT GGCATGGCCG GGAATTTTCC CTGGAAATTC GGGTTCCTGC TCTGGGTGCC 
ATGATATTAA AGCCCGAACT TGCATAA 

 

Protein sequence

MAWVGEDNAL QVQDIKMQSK IQKDSPLLTQ EEMYLFNCGE FYYSYRKLGA HFLEHKGRWG 
TYFAVWAPQA RQVSVVGDFN GWCGMNHSLQ KWEEQGIWTL FIPGLPTGEI YKYEILNSSG 
ESVLKADPYA FFSEVRPHTA SVIYSLEDYA WGDQAWLAQR KTRNPKVLPL SSYEIHLGSW 
RRTEDGRFLN YAQLVTVLIP YVKSLGYTHI EILPLMEHPY DGSWGYQITG FYACTSRYGT 
PHDLMYLIDQ CHQAGIGVIL DWVPGHFCMD AHGLGKFDGS PLYEREVHEQ WGTYKFDYSR 
SEVRSFLISN AVFWLDVFHV DGLRVDGVSS MLYLDYGKEK GAWQPNRYGG RENLEAVGFI 
KQLNATLHGL YPDALLIAEE ATDWQGVTGP LDQEGLGFTF KWNMGWMNDT LRYIGLDFNE 
RRSFHQLLTF PMMYAYAESY ILPLSHDEVV HGKKSLLDKM PGDYGQKFAG LRGLTTYFMT 
SPGKKLLFMG GEIPQFIEWR EDRELDWFLM DYELHRKYHG FVQQLNGLYL REKALWEIDG 
DWTGFEWIDV HNHEQGVIVF CRKGKSFQDR LVVLINFQPY NYERYRIGVE MAKGYREILN 
TDSTDFGGWG MTNPGLLKVE GVPWHGREFS LEIRVPALGA MILKPELA