Gene Dhaf_3177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3177 
Symbol 
ID7260193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp3403411 
End bp3404076 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content48% 
IMG OID643563101 
ProductSNARE associated Golgi protein 
Protein accessionYP_002459634 
Protein GI219669199 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAATA AGCTCTTAAA TGTAAAAAAC CTGCAAACTA AAGGTTCCGG CGCCGCTTTC 
CTGATTACCG GGGTTTTTCT GACTTTACTT GTGGCTTTCC TTTATTTTGA CCGGAGCTCT 
GAGCTTTCGG CTGTCATCCA GAATTTAGGA GCGGCGGGAA TGCTGCTCGC CGTTATGCTC 
ATGGCTGTTT TCTGCCTGAC CCCCATTCCT TCGGAAGGCC TGGTTGTAGT CTTCCTGAAG 
ATCTATGGCA TATACCTTGG GACATTTCTG GCCTGGCTGG GATGCAATCT GAGTACCTTG 
GTTATCTTTT TTGCAGCCAG GCATTACGGG CAGATCTTTT TTAAAAAGCT TCTGACTCCG 
GAGCGGTTTA AGCTGGTGGA TAGCTGGGTT AACGATAAAG GAACCTGGGG TTTGTTTATC 
GCCCGGCTGC TGCCGCTCCC GGCTTTCATT GTCAATTACG CTGCCGGAAT GATTCCGTCG 
ATTAAATTGT GGCCCTACTT CTGGACAGCT GCTTTAGCCA TCATTCCCTA TTATGTGGGA 
ACTGCTTTAG TCTATCTGGG GATTACAGCC AAGATGTGGA TTTGGCTGGT GATCGGCGGA 
GCAGCAATTC TTATTTTCTG GAGCATTAGC TATCTACTTA ACCGAAAATC CCTCAAAGTC 
GGTTAA
 
Protein sequence
MQNKLLNVKN LQTKGSGAAF LITGVFLTLL VAFLYFDRSS ELSAVIQNLG AAGMLLAVML 
MAVFCLTPIP SEGLVVVFLK IYGIYLGTFL AWLGCNLSTL VIFFAARHYG QIFFKKLLTP 
ERFKLVDSWV NDKGTWGLFI ARLLPLPAFI VNYAAGMIPS IKLWPYFWTA ALAIIPYYVG 
TALVYLGITA KMWIWLVIGG AAILIFWSIS YLLNRKSLKV G