Gene Dhaf_3112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3112 
Symbol 
ID7260123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp3326998 
End bp3327624 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content47% 
IMG OID643563032 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002459571 
Protein GI219669136 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0000156006 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTGG GAGAAAAAAT ATATGAGCTC AGGACAAAGA ATGCTATGTC TCAGGGGGAC 
TTGGCCAATA CCTTGGAAGT ATCGCGTCAA TCCGTTTCCA AATGGGAAAA CAATACCTCG 
GTTCCCGAAC TGGACAAATT AGTGAAAATG AGCGAAGTAT TCAGCATTTC CCTTGACGAA 
TTGATCCGGG GCGAAAAAAC GGAAAAAATG CAGCGCGAAA CCCAATCCCC CGATATAAGC 
GCTCCTCCAA ACGGCTTGCC TCCACGAAAA ATTGTCGGTC TTTTTATTCT GGGCTTTGGC 
CTCATCGTAT TCCTGTTCCT GTCATTTCTG GGCGATCTGC TGTCCGCGCT TTTCCTAAGT 
TCACCGCTGT TCGTATGTGC GCTAATTTGC CTGACGGTCA ATAAGCATAC CGTTCTATGG 
TGTGGTTGGG CACTGTATGG TTTGATTTAT GCGTATCTGC GATATGCCAC GGGTATCCGC 
CTATGGTGGA TATTTCAGGG ATGGCTGTAT CGCGGCGGAT TGGAGATACA TGCTGCAATT 
GCCTGGTTAC AGGTACTGGG ACTCGTGGCA TTAATAATAA GCACAGGTCG GTTATTTTAT 
AAAAGCCGAA AAAATTCACC GGATTGA
 
Protein sequence
MTLGEKIYEL RTKNAMSQGD LANTLEVSRQ SVSKWENNTS VPELDKLVKM SEVFSISLDE 
LIRGEKTEKM QRETQSPDIS APPNGLPPRK IVGLFILGFG LIVFLFLSFL GDLLSALFLS 
SPLFVCALIC LTVNKHTVLW CGWALYGLIY AYLRYATGIR LWWIFQGWLY RGGLEIHAAI 
AWLQVLGLVA LIISTGRLFY KSRKNSPD