| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3075 |
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| Symbol | |
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| ID | 7260086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 3292702 |
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| End bp | 3293379 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643562995 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_002459534 |
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| Protein GI | 219669099 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00000922891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTATTC TGGGGAGATT CAAAGAGATT ATGTCAAGCA ATATCAACGC CTTGCTTGAT
AAAGTGGAAG ATCCGGAAAA GATGATCGAG CAGTGCCTGC GGAACCTGAA CAGCGATCTG
GGCAAGGTCA AGTCGGAAAC CGCCACCATT ATGGCGGAAG AGCAGCGCGC TCAAAGAGAG
CTGGATGAAT GTCATGCCGA CATTGAAAAA ATGCAGTCTT ACGCGCTCAA AGCGCTGGAA
GCTGGCAATG AAGCGGATGC CAGAAAGTTT CTGACCCATA AAGCCTCTTT GCAAGCCAAG
CTGACCGGAC TGCAGGAAGC CTGCAATCTT GCCCAGGCCA ACGCTGCCCA TATGCGGGAA
ATGCATGATA AGCTGGTTGG GGATATCGGT GAACTGGAAT CCCGCAAGGA GATGATTAAG
GGCAAACTGG CTGCGGCGAA GACCCAGGAC CGCATGAACA AAATGATGTC CTCGGTTTCA
GGTGCCAACG ATTCAATGGC CAGCTTTGAG CGGTATGAAG CGCTGGCGGA TAAGGCCCTG
GACCAAGCCA AAGCCATGGC TGAGCTGAAC AAGTCGTCCC AGTCTTCCAT TAAGGATCTG
GCGGCCAAAT ATGATGCAGA GCCTGATACC AGCATTGATG ATGAGCTTGC CGCCTTAAAA
GCCAGCTTAA ATAAGTAA
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| Protein sequence | MSILGRFKEI MSSNINALLD KVEDPEKMIE QCLRNLNSDL GKVKSETATI MAEEQRAQRE
LDECHADIEK MQSYALKALE AGNEADARKF LTHKASLQAK LTGLQEACNL AQANAAHMRE
MHDKLVGDIG ELESRKEMIK GKLAAAKTQD RMNKMMSSVS GANDSMASFE RYEALADKAL
DQAKAMAELN KSSQSSIKDL AAKYDAEPDT SIDDELAALK ASLNK
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