Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3043 |
Symbol | |
ID | 7260054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 3261245 |
End bp | 3262069 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643562963 |
Product | NLP/P60 protein |
Protein accession | YP_002459502 |
Protein GI | 219669067 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.166608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTCTT CCTCTAAAAG GGGATGGGTG GCCAGTGTGG TGTTATCCGG CACCTTATTG GTAAGCAGCC TCCCGGGCAT CTATGGGCCT GGAAGTGCCG CAGTGCCTGT GACAAGCTCC GAATCTATTC TCTTAAGGAA CGCTTCATTA TTTCAGACTC AGCAGGCTCA AACTCAAACT GTTGCCGATA CGGTACTCTC CCCTGAGGTT CAAGCAGAAA AAAAGGATGT GATCCGGCAA CCTGAAGCAG CAGCAATGGC CTTAGCTTAC GCTTCGGTAT CTGTAGCTGC CGATACGGAT AGTCAGAGGG AATCACAGCA ATTTACAGAA GAGGCTCAGG AAGATATCGT GTCTACCCCT GAAGAAACGA TGGCAGCGAT GGACATCGAA AAGCTTTCCC AAGAGCGGGC TTTGCGACAA GCTGCGGCTG CTCCTGTTCA GGAGATCTCC CGTGGCGGTA GTTCCAAAGT CGAAGAAATC AGCGACAATG CCCAAAAGCT GATCGGTACC CCCTATGTGT TTGGCGGGAC GACTACGAAT GGCTTTGATT GCTCCGGTTT TACTCAATAT GTATTTAAAG GTTCAGGAAT TGACTTGCCC CGAACCTCAT ATGCTCAATA TGGAATAGGA ACAGCAGTCA GCAAAGACGA GCTTCAGATC GGTGATTTGG TCTTCTTCGC CACTTACGAT AGCGGAGCGT CCCACGTGGG AATCTATATA GGAGAAGAGA ACTTTATTCA TGCCGCCAGA AGCGGTATTA AGATCACCGG CTTATCGGAC AGTTATTATG CTGGTCGTTA CCTTGGAGCC AGGAGAGTTT TCTAA
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Protein sequence | MDSSSKRGWV ASVVLSGTLL VSSLPGIYGP GSAAVPVTSS ESILLRNASL FQTQQAQTQT VADTVLSPEV QAEKKDVIRQ PEAAAMALAY ASVSVAADTD SQRESQQFTE EAQEDIVSTP EETMAAMDIE KLSQERALRQ AAAAPVQEIS RGGSSKVEEI SDNAQKLIGT PYVFGGTTTN GFDCSGFTQY VFKGSGIDLP RTSYAQYGIG TAVSKDELQI GDLVFFATYD SGASHVGIYI GEENFIHAAR SGIKITGLSD SYYAGRYLGA RRVF
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